Gene detail

Gene detail information of Glyur000255s00016813

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G15120.1	2.00E-63	Protein of unknown function (DUF1637)
NR	XP_004493204.1	1.43E-165	PREDICTED: 2-aminoethanethiol dioxygenase-like [Cicer arietinum]
trEMBL	tr\|Q2HVC5\|Q2HVC5_MEDTR	4.00E-163	Cupin, RmlC-type {ECO:0000313\|EMBL:ABD28522.1}

Sequence

Transcript Sequence

>Glyur000255s00016813.1
CACACATACNTTTGTACTGTGTNGCTGCCAATATCAATTTTCTTCTTCTACCCCTTTTGAGTCAACCACTACTATTTCATCTGGGAGTCTCAAAAGTTTCAATTTTGACAATTTCTGAATTCTGGGTATTGAGTTTTTCATTTTTTTTTTTCTGTTTTCCACAATCCAAAAGTTGAGGCAAAACTAAACTTGGGGGTATTCAAGGAGGAGTGTTCCAGTGTGCCATTTGATCTTCTGAGCTTTTTTTTTCATGCGTGTGAGTATAAAAATGTTCAAGTGAAAAAAGTGAGGCTATTCACTTAAAAGATTTGGTTCACACATTTGAAGGGAGTTATTGTTATTATTACGAGTGGTGTGTTGTGTGTGTGTGTGTGTGTTGGTGGGAATTAATGGAAGCAGGATTGGTTGAGCAAGGAAGAGACAGAGTTGGCGCAGGACATGTTAACAAGGTTGGTTACGTGAGAAGGGTCATTGCAAAGAAGAGGAAGCTTAATCATCATAACCATAATAACCACCGAAGCAGGGTAGTTAAGAGGCATGTCCCAAAGGCACTTCAGGAGTTATTTGATTCATGCAAACAAACATTCAAAGGCCCTGATACGGTTCCTTCNCCACAACATGTTCAGAAACTGTGCCACATCCTCGATAACATGAAGCCAGACGATGTTGGGCTAAGTAGAGATCTGCAATTCTTCAAGCCAGGAAATGTTATCAAAGAGAANCAAAGGGTCACATACACCACAGTGTACAAGTGTGACAATTTCTCTCTATGTATCTTTTTCCTACCTGAAAGAGGAGTGATTCCCCTCCATAACCACCCTGGCATGACTGTTTTCAGCAAGCTTCTATTAGGACAAATGCACATTAAGTCCTATGATTGGGTTGATGATGATCCTCATGTCTCTCACAACTTGTTGCAACAACCATCAAAATTGAGATTGGCAAAGTTAAAAGCTGATAGTGTGTTCACAGCACCTTGTGATGCTTGTGTGTTGTATCCAACGACAGGAGGCAACATCCATGAATTCACAGCCATAACTCCATGCGCTGTGCTTGATGTCATTGGTCCTCCTTATTCCAAAGATGATGGCAGGGACTGTTCCTATTACACAGATCACCCTTGTGATCATGCTTTTCCCAGTGAAGAGATTAATGGCGAGGTGAAAGACAAGAATGATGGTTACGCGTGGNTAGAAGAATTAANTGAGATGCCAGAAAACTCTCAAATGGATGGGATTGAGTATTTGGGTCCCCCCATTACTGACACTACAACAGCCTTTTAGTTTCAACATGTACATTGTATTCCATCCATATATCCATATCCATCCCCTGCACTACACTTTTCATCATTCTATTCTATACATATTACAAAGTGCCCCAATTTCCCTCTTTCCCTTTGTGTCCATATGCGTGTGTTGGCTTTTGTTCGTTGATGCAGNCTATACCGTAAGAGATTGNTTATAGTCGTTGGATATAATAAATTTATATTAAAAATGCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00255	53647	57546	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K10712	ADO	EC:1.13.11.19	Taurine and hypotaurine metabolism	map00430

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0047800 cysteamine dioxygenase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000255s00016813.1	PF07847.7	DUF1637	84	289	4.10E-66

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.121
SRR1783600	control	0.122
SRR1783602	moderate drought stress	0.076
SRR1811619	moderate drought stress	0.076

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.734
DRR006520	Root Summer glycyrrhizin high producing strain	3.745
DRR006521	Root Winter glycyrrhizin high producing strain	944.765
DRR006522	Root Winter glycyrrhizin high producing strain	918.768
DRR006523	Root Summer glycyrrhizin low producing strain	18.805
DRR006524	Root Summer glycyrrhizin low producing strain	19.647
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.159
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.236

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.423
SRR2868004	Drought Stress (root)	0.067
SRR2967015	Control (root)	0.275

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.088
SRR9715740	Leaf	0.442
SRR9715741	Leaf	0.305
SRR9715739	Root	0.165
SRR9715742	Root	0.720
SRR9715743	Root	0.345

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	518.125
SRR8749028	MeJA induced 9h	1163.231
SRR8749029	MeJA induced 9h	1394.131
SRR8749030	Uninduced	271.366
SRR8749031	Uninduced	1040.738
SRR8749032	Uninduced	1423.262

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.698
SRR8400027	Control - Root	11.078