Gene detail information of Glyur000255s00016809 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AAT01285.1 | 1.20E-14 | cold-induced protein [Ammopiptanthus mongolicus] |
| trEMBL | tr|Q6PNN7|Q6PNN7_9FABA | 4.00E-15 | Cold-induced protein {ECO:0000313|EMBL:AAT01285.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00255 | 19867 | 20307 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000255s00016809.1 | PF00257.14 | Dehydrin | 2 | 132 | 4.70E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 108.517 |
| SRR1783600 | control | 107.247 |
| SRR1783602 | moderate drought stress | 386.187 |
| SRR1811619 | moderate drought stress | 375.380 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 153.833 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 160.477 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23594.744 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22768.432 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 107.783 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 111.987 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 867.409 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 872.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 267.945 |
| SRR2868004 | Drought Stress (root) | 289.431 |
| SRR2967015 | Control (root) | 433.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1014.340 |
| SRR9715740 | Leaf | 729.334 |
| SRR9715741 | Leaf | 559.199 |
| SRR9715739 | Root | 57.173 |
| SRR9715742 | Root | 340.125 |
| SRR9715743 | Root | 269.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 545.972 |
| SRR8749028 | MeJA induced 9h | 1322.056 |
| SRR8749029 | MeJA induced 9h | 1724.740 |
| SRR8749030 | Uninduced | 882.938 |
| SRR8749031 | Uninduced | 1380.102 |
| SRR8749032 | Uninduced | 2302.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1029.900 |
| SRR8400027 | Control - Root | 510.452 |