Gene detail information of Glyur000255s00016808 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN46750.1 | 5.88E-24 | hypothetical protein glysoja_015001 [Glycine soja] |
| trEMBL | tr|I1MKY7|I1MKY7_SOYBN | 2.00E-24 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G04210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00255 | 10436 | 10666 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.557 |
| SRR1783600 | control | 2.961 |
| SRR1783602 | moderate drought stress | 2.705 |
| SRR1811619 | moderate drought stress | 2.668 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.967 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.007 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 632.181 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 611.097 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.779 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.331 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.890 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.435 |
| SRR2868004 | Drought Stress (root) | 1.306 |
| SRR2967015 | Control (root) | 2.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.196 |
| SRR9715740 | Leaf | 0.837 |
| SRR9715741 | Leaf | 2.355 |
| SRR9715739 | Root | 36.540 |
| SRR9715742 | Root | 31.167 |
| SRR9715743 | Root | 33.200 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 156.893 |
| SRR8749028 | MeJA induced 9h | 176.744 |
| SRR8749029 | MeJA induced 9h | 232.228 |
| SRR8749030 | Uninduced | 69.758 |
| SRR8749031 | Uninduced | 56.033 |
| SRR8749032 | Uninduced | 94.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.526 |
| SRR8400027 | Control - Root | 79.998 |