Gene detail information of Glyur000254s00017598 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003617256.1 | 6.09E-11 | hypothetical protein MTR_5g089580 [Medicago truncatula] |
| trEMBL | tr|G7K343|G7K343_MEDTR | 2.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:AET00215.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00254 | 64100 | 64354 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.639 |
| SRR1783600 | control | 60.649 |
| SRR1783602 | moderate drought stress | 95.992 |
| SRR1811619 | moderate drought stress | 96.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.196 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.265 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.015 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.488 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.873 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.018 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.623 |
| SRR2868004 | Drought Stress (root) | 6.007 |
| SRR2967015 | Control (root) | 4.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 31.719 |
| SRR9715740 | Leaf | 11.359 |
| SRR9715741 | Leaf | 17.087 |
| SRR9715739 | Root | 109.278 |
| SRR9715742 | Root | 79.580 |
| SRR9715743 | Root | 68.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.247 |
| SRR8749028 | MeJA induced 9h | 0.181 |
| SRR8749029 | MeJA induced 9h | 0.303 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.750 |
| SRR8400027 | Control - Root | 16.244 |