Gene detail information of Glyur000254s00017594 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G12300.1 | 5.00E-67 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | XP_003545163.1 | 0 | PREDICTED: uncharacterized protein LOC100818818 [Glycine max] |
| trEMBL | tr|I1M745|I1M745_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G03910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00254 | 44412 | 45803 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000254s00017594.1 | PF00168.25 | C2 | 31 | 115 | 5.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.692 |
| SRR1783600 | control | 28.502 |
| SRR1783602 | moderate drought stress | 29.558 |
| SRR1811619 | moderate drought stress | 29.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 49.667 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.925 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.768 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.470 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 42.795 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.175 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.926 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 74.910 |
| SRR2868004 | Drought Stress (root) | 94.694 |
| SRR2967015 | Control (root) | 81.890 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.575 |
| SRR9715740 | Leaf | 23.421 |
| SRR9715741 | Leaf | 19.593 |
| SRR9715739 | Root | 6.939 |
| SRR9715742 | Root | 43.071 |
| SRR9715743 | Root | 34.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 57.921 |
| SRR8749028 | MeJA induced 9h | 24.824 |
| SRR8749029 | MeJA induced 9h | 32.643 |
| SRR8749030 | Uninduced | 8.277 |
| SRR8749031 | Uninduced | 3.377 |
| SRR8749032 | Uninduced | 3.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 73.535 |
| SRR8400027 | Control - Root | 69.398 |