Gene detail information of Glyur000253s00020245 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G40095.1 | 5.00E-54 | Alpha/beta hydrolase related protein |
| NR | XP_004500482.1 | 1.47E-117 | PREDICTED: uncharacterized protein LOC101496112 isoform X2 [Cicer arietinum] |
| trEMBL | tr|G7JB79|G7JB79_MEDTR | 8.00E-115 | Alpha/beta hydrolase-like protein {ECO:0000313|EMBL:AES71131.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00253 | 190529 | 193675 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.896 |
| SRR1783600 | control | 2.876 |
| SRR1783602 | moderate drought stress | 2.845 |
| SRR1811619 | moderate drought stress | 2.782 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.718 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.107 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.253 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.950 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 43.622 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.946 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.032 |
| SRR2868004 | Drought Stress (root) | 67.399 |
| SRR2967015 | Control (root) | 74.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 123.765 |
| SRR9715740 | Leaf | 99.903 |
| SRR9715741 | Leaf | 193.137 |
| SRR9715739 | Root | 30.658 |
| SRR9715742 | Root | 35.871 |
| SRR9715743 | Root | 35.113 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.160 |
| SRR8749028 | MeJA induced 9h | 46.752 |
| SRR8749029 | MeJA induced 9h | 24.765 |
| SRR8749030 | Uninduced | 35.437 |
| SRR8749031 | Uninduced | 29.208 |
| SRR8749032 | Uninduced | 21.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.320 |
| SRR8400027 | Control - Root | 32.604 |