Gene detail

Gene detail information of Glyur000253s00020230

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G55950.1	0	CRINKLY4 related 3
NR	XP_004500493.1	0	PREDICTED: putative serine/threonine-protein kinase-like protein CCR3-like [Cicer arietinum]
COG	YP_001543477.1	1.00E-19	serine/threonine kinase [Herpetosiphon aurantiacus DSM 785]
Swissprot	tr\|Q9LY50\|ACCR3_ARATH	0	Putative serine/threonine-protein kinase-like protein CCR3 (Precursor)
trEMBL	tr\|K7MPI9\|K7MPI9_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G03040.2}

Sequence

Transcript Sequence

>Glyur000253s00020230.1
ATGAAGAAACCGCCTCCCTCCTCCGTCAATCCCCGTCTCGCCGCCGTCACCGTTACCGTAGTCATCTTCTCCTTGCTAACCTCTTCCCATGCTTTAGGCTCCGGCGCCACCCTCGCCGTAACCGACTCCCCCGCCACCGTGTGCGGCATCGTAGCAGGGGAATCAACACAGAGCATCGAGTGTTACCGGCAACAACAAGAACAGGTCATCGCCGTCGTCCCCAACGTTTCCTTCTCATCAATTTCCGGTGGCAGAACCTACTTCTGNGGCCTCAGATCCGGTAACTACAGCTTGCATTGCTGGGACAATTCCTTCCAAAGCAAAAGGCTTTACAAAAACGACTCTGTTCGATTGGAGAATCTCGCAGTCGGTGGTGACGACGCCGGAGTCTGCGCCACGGTGGTCGGAGACGGAACGGTGAGGTGCTGGAGAACAAAAAACGACGATTATGAACTACCTGGGTCTGATCAATTCGCTTCGATCTCGTCTGGGTCGGTCTTCTCTTGTGGGATTCTGAGGAACAGTTCAAAAGTTCGNTGTTGGGGAGACAGGGTAGTTGCCGGTCGGATACAGAACGAGTTTGGGAACATGTCAATGTTGAGTCTCGTAGCAGGTGGTGAACACGTGTGTGGGTTGAACTCAACTGGGTTTTTGGTATGCAGAGGAAACAACAACAGTGCTGGGCAATTGGATGTTCCCCAACAAGGTGGGGCTTTTGAGTATGCTGGGTTATCGCTCGGCGCTGAACACGGTTGTGCGCTTAGAAGATTGAATGGTTCCGTNGTTTGTTGGGGTGGGAGAGGGAAATTCTCTGTGAACCAAACAGAAGGAGTGTTTTTTGAGTTAATTGTTTCTGGCTCCAATTTCACTTGTGGATTGAAAACAAGTACTTTCTCTGTGTTGTGTTGGGGCCCTGGTTGGTCTAATAATGGTTCTACCTCTGAGCTTCCCTTGTCTCGTGTTCTTCCAGGGCCTTGTGTTCAATCCTCTTGTAGTGAGTGTGGTATATACCTTGATTCTCAATCTCTCTGTTCTGGCTCTGCTCAAATTTGCAAGCCAAATACTTGTAACCCTCAAATTACAACACCACCACCACCGTCGACGCAACCGCAACCGCAACCGCCAGCACCGTCCCCTCCACCGTCGTCGTCGCGATCAAAGACATTGACAAGAGGCTTATTGNCGTTTGTCATTGTTGGGTCCGTGGGAGCATTTGCTGGTATATGCACAATAATTTATTGCCTNTGGAGTGGTGTTTGTTTTGGGAAAAAGAAAGTACACAATTCAGTGCAACCAAGAATCACTAGAGGTAGCAGCAGCAGCAGTTCCAATAATGGTGTTGGTGGTTCCAANAATAGCCCTTCTTCGATTATTTCATCAGCGATTAAGCGTCAAGGATCAAGAATAATGAGGCGACAGAGGAGTGGACCCTCATCAACAAAACACCCAGAAAGAGCAGAGGAGTTCACACTTTCTGAGCTTGTAGCAGCCACCAACAATTTCTCACACGAGAACAAGATTGGTGCTGGAAGCTTCGGTGTTGTGTACAGAGGCAAACTCTCCGATGGTCGCGACGTGGCAATCAAGAGGGGTAGAACCGAAACCGAAACCGAAACCGAAACCGGTTCAAAGGTTAAAAAATTGTTTCAAGAGAAAGAAAGTGCATTTGAGTCTGAATTGGCCTTCTTGTCACGTTTACACCACAAGCACTTGGTTAGGCTAGTTGGGTTCTGTGAAGAAAAAGATGANAGGCTCTTGGTGTATGAGTATATGAAGAATGGTGCACTCTACGATCACTTGCACGGCAAGGAAAAGGGTAGTAGCAGTGTGTTGAACTCGTGGAAAATGAGGATCAAGATTGCTCTGGATGCTTCAAGAGGAATAGAGTATCTACATAACTATGCGGTTCCGTCTATAATTCATAGAGATATCAAGTCTTCGAATATCCTTCTTGATGCGACTTGGACGGCTAGAGTTTCTGATTTTGGGTTGTCATTGATGAGTCCTGAACCGGACCGTGATTACAAGCCAATGAAGGCAGCAGGAACGGTTGGTTACATTGATCCTGAGTACTATGGTCTAAATGTTTTGACGGCGAAGAGTGATGTTTATGGGCTTGGTGTTGTGTTACTAGAACTCTTGACGGGGAAAAGAGCGATATTCAAGCACGGTGGTGGAGAAGACGGTGGGACACCATTGAGTTTAGTGGACTTTGCAGTGCCTGCTATCATGGCCGGTGAATTGGTCAAGATTTTGGACCCGAGAGTTGGACCACCGGAGCCGAATGAAGCGGAGGCGGTGGAGCTTGTGGCGTATACTGCTATGCATTGTGTGAATTTGGAAGGGAAAGATAGACCAACCATGGCTGACATTGTGGCCAATTTGGAACAGGCTTTGGTTATTTGTGATGGTGGGAGTGACAGCAATTCAAGCGTTACAATCACTGTTGTTTCAGATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00253	52221	54680	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.4.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000253s00020230.1	PF00069.20	Pkinase	503	792	3.70E-43

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.863
SRR1783600	control	0.856
SRR1783602	moderate drought stress	0.918
SRR1811619	moderate drought stress	0.883

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.909
DRR006520	Root Summer glycyrrhizin high producing strain	3.921
DRR006521	Root Winter glycyrrhizin high producing strain	0.045
DRR006522	Root Winter glycyrrhizin high producing strain	0.044
DRR006523	Root Summer glycyrrhizin low producing strain	2.731
DRR006524	Root Summer glycyrrhizin low producing strain	2.756
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.205
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.315

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.859
SRR2868004	Drought Stress (root)	24.254
SRR2967015	Control (root)	25.725

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.388
SRR9715740	Leaf	17.696
SRR9715741	Leaf	30.155
SRR9715739	Root	37.873
SRR9715742	Root	81.653
SRR9715743	Root	74.396

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	14.085
SRR8749028	MeJA induced 9h	28.172
SRR8749029	MeJA induced 9h	15.310
SRR8749030	Uninduced	44.321
SRR8749031	Uninduced	25.356
SRR8749032	Uninduced	16.283

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.229
SRR8400027	Control - Root	12.798