Gene detail information of Glyur000252s00012682 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23760.1 | 6.00E-69 | |
| NR | XP_004503817.1 | 1.55E-117 | PREDICTED: uncharacterized protein At4g14100-like [Cicer arietinum] |
| Swissprot | tr|Q67YC9|Y4141_ARATH | 3.00E-83 | Uncharacterized protein At4g14100 (Precursor) |
| trEMBL | tr|I3S3L7|I3S3L7_LOTJA | 2.00E-115 | Uncharacterized protein {ECO:0000313|EMBL:AFK34859.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00252 | 200619 | 205622 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.588 |
| SRR1783600 | control | 14.781 |
| SRR1783602 | moderate drought stress | 9.653 |
| SRR1811619 | moderate drought stress | 9.557 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.521 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.582 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.384 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.995 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.052 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.296 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.511 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.596 |
| SRR2868004 | Drought Stress (root) | 2.974 |
| SRR2967015 | Control (root) | 4.583 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 41.578 |
| SRR9715740 | Leaf | 47.773 |
| SRR9715741 | Leaf | 33.278 |
| SRR9715739 | Root | 15.409 |
| SRR9715742 | Root | 11.056 |
| SRR9715743 | Root | 11.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.826 |
| SRR8749028 | MeJA induced 9h | 2.115 |
| SRR8749029 | MeJA induced 9h | 3.800 |
| SRR8749030 | Uninduced | 0.750 |
| SRR8749031 | Uninduced | 1.244 |
| SRR8749032 | Uninduced | 2.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.735 |
| SRR8400027 | Control - Root | 5.483 |