Gene detail information of Glyur000252s00012679 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G51050.1 | 0 | Mitochondrial substrate carrier family protein |
| NR | XP_003524327.2 | 0 | PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-2-like isoform X1 [Glycine max] |
| Swissprot | tr|O04619|ADNT1_ARATH | 2.00E-60 | Mitochondrial adenine nucleotide transporter ADNT1 |
| trEMBL | tr|K7KRB9|K7KRB9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33350.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00252 | 187637 | 191329 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000252s00012679.1 | PF13405.1 | EF-hand_6 | 99 | 123 | 0.00021 |
| Glyur000252s00012679.1 | PF13499.1 | EF-hand_7 | 129 | 188 | 1.70E-08 |
| Glyur000252s00012679.1 | PF00153.22 | Mito_carr | 230 | 312 | 1.90E-22 |
| Glyur000252s00012679.1 | PF00153.22 | Mito_carr | 321 | 409 | 2.30E-23 |
| Glyur000252s00012679.1 | PF00153.22 | Mito_carr | 418 | 508 | 1.10E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.326 |
| SRR1783600 | control | 2.316 |
| SRR1783602 | moderate drought stress | 2.572 |
| SRR1811619 | moderate drought stress | 2.567 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.748 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.701 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.293 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.250 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.856 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.675 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.803 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.730 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.486 |
| SRR2868004 | Drought Stress (root) | 9.132 |
| SRR2967015 | Control (root) | 10.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.257 |
| SRR9715740 | Leaf | 6.756 |
| SRR9715741 | Leaf | 5.040 |
| SRR9715739 | Root | 1.773 |
| SRR9715742 | Root | 4.145 |
| SRR9715743 | Root | 3.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.194 |
| SRR8749028 | MeJA induced 9h | 12.039 |
| SRR8749029 | MeJA induced 9h | 14.840 |
| SRR8749030 | Uninduced | 7.725 |
| SRR8749031 | Uninduced | 4.772 |
| SRR8749032 | Uninduced | 6.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.773 |
| SRR8400027 | Control - Root | 7.428 |