Gene detail information of Glyur000252s00012673 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G59880.1 | 2.00E-05 | |
| NR | NP_001235891.1 | 1.91E-22 | uncharacterized protein LOC100305729 [Glycine max] |
| trEMBL | tr|C6SWE7|C6SWE7_SOYBN | 7.00E-23 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G33300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00252 | 164406 | 165045 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.296 |
| SRR1783600 | control | 16.582 |
| SRR1783602 | moderate drought stress | 19.059 |
| SRR1811619 | moderate drought stress | 18.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.984 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.396 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 197.754 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 192.943 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 56.839 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 56.877 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.262 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.022 |
| SRR2868004 | Drought Stress (root) | 93.881 |
| SRR2967015 | Control (root) | 70.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.923 |
| SRR9715740 | Leaf | 0.636 |
| SRR9715741 | Leaf | 4.267 |
| SRR9715739 | Root | 31.827 |
| SRR9715742 | Root | 26.388 |
| SRR9715743 | Root | 25.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 90.877 |
| SRR8749028 | MeJA induced 9h | 228.198 |
| SRR8749029 | MeJA induced 9h | 197.082 |
| SRR8749030 | Uninduced | 34.402 |
| SRR8749031 | Uninduced | 119.633 |
| SRR8749032 | Uninduced | 148.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.698 |
| SRR8400027 | Control - Root | 17.555 |