Gene detail information of Glyur000250s00014109 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21600.2 | 1.00E-12 | plastid transcriptionally active 6 |
| NR | KHN10172.1 | 2.94E-15 | hypothetical protein glysoja_017776, partial [Glycine soja] |
| trEMBL | tr|I1JZ16|I1JZ16_SOYBN | 4.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G42430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00250 | 122659 | 139219 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.136 |
| SRR1783600 | control | 0.118 |
| SRR1783602 | moderate drought stress | 1.181 |
| SRR1811619 | moderate drought stress | 1.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.041 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.513 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.391 |
| SRR2868004 | Drought Stress (root) | 1.265 |
| SRR2967015 | Control (root) | 0.947 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.056 |
| SRR9715742 | Root | 0.802 |
| SRR9715743 | Root | 0.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.870 |
| SRR8749028 | MeJA induced 9h | 4.398 |
| SRR8749029 | MeJA induced 9h | 6.343 |
| SRR8749030 | Uninduced | 5.957 |
| SRR8749031 | Uninduced | 3.345 |
| SRR8749032 | Uninduced | 3.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.520 |
| SRR8400027 | Control - Root | 0.127 |