Gene detail information of Glyur000249s00015859 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35670.1 | 8.00E-70 | IQ-domain 33 |
| NR | KHN44737.1 | 0 | Protein IQ-DOMAIN 1 [Glycine soja] |
| Swissprot | tr|Q9SF32|IQD1_ARATH | 2.00E-11 | Protein IQ-DOMAIN 1 |
| trEMBL | tr|K7M515|K7M515_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G05600.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00249 | 21655 | 33811 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.605 |
| SRR1783600 | control | 3.492 |
| SRR1783602 | moderate drought stress | 3.345 |
| SRR1811619 | moderate drought stress | 3.216 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.154 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.921 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.713 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.746 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.309 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.415 |
| SRR2868004 | Drought Stress (root) | 17.137 |
| SRR2967015 | Control (root) | 19.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.913 |
| SRR9715740 | Leaf | 0.931 |
| SRR9715741 | Leaf | 1.374 |
| SRR9715739 | Root | 0.174 |
| SRR9715742 | Root | 1.567 |
| SRR9715743 | Root | 1.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.034 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.095 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.503 |
| SRR8400027 | Control - Root | 16.938 |