Gene detail information of Glyur000249s00015856 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003616794.1 | 1.66E-18 | hypothetical protein MTR_5g084330 [Medicago truncatula] |
| Swissprot | tr|P23137|GRP1_TOBAC | 4.00E-10 | Glycine-rich protein (Precursor) |
| trEMBL | tr|G7KH64|G7KH64_MEDTR | 6.00E-19 | Leguminosin group485 secreted peptide {ECO:0000313|EMBL:AES99752.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00249 | 10376 | 11366 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000249s00015856.1 | PF07172.6 | GRP | 1 | 96 | 2.10E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.007 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.241 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.241 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.464 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.545 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.917 |
| SRR2868004 | Drought Stress (root) | 0.184 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 527.683 |
| SRR9715740 | Leaf | 58.359 |
| SRR9715741 | Leaf | 720.936 |
| SRR9715739 | Root | 0.164 |
| SRR9715742 | Root | 3.357 |
| SRR9715743 | Root | 4.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.134 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.375 |
| SRR8749032 | Uninduced | 1.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.511 |
| SRR8400027 | Control - Root | 37.998 |