Gene detail information of Glyur000248s00011327 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14385.1 | 1.00E-43 | |
| NR | XP_004495102.1 | 1.77E-105 | PREDICTED: chromatin modification-related protein MEAF6-like [Cicer arietinum] |
| trEMBL | tr|V7BH93|V7BH93_PHAVU | 5.00E-105 | Uncharacterized protein {ECO:0000313|EMBL:ESW16895.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00248 | 220820 | 223941 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000248s00011327.1 | PF09340.5 | NuA4 | 14 | 92 | 8.30E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.551 |
| SRR1783600 | control | 5.625 |
| SRR1783602 | moderate drought stress | 5.597 |
| SRR1811619 | moderate drought stress | 5.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.249 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.699 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.454 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.353 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.022 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.081 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.061 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 18.623 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.824 |
| SRR2868004 | Drought Stress (root) | 32.070 |
| SRR2967015 | Control (root) | 31.822 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.674 |
| SRR9715740 | Leaf | 29.982 |
| SRR9715741 | Leaf | 42.437 |
| SRR9715739 | Root | 3.852 |
| SRR9715742 | Root | 12.655 |
| SRR9715743 | Root | 8.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.162 |
| SRR8749028 | MeJA induced 9h | 20.992 |
| SRR8749029 | MeJA induced 9h | 42.518 |
| SRR8749030 | Uninduced | 28.691 |
| SRR8749031 | Uninduced | 33.164 |
| SRR8749032 | Uninduced | 29.192 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.978 |
| SRR8400027 | Control - Root | 31.488 |