Gene detail information of Glyur000247s00015502 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62580.1 | 2.00E-134 | ARM repeat superfamily protein |
| NR | KEH31866.1 | 0 | microtubule-associated TORTIFOLIA-like protein [Medicago truncatula] |
| Swissprot | tr|Q9T041|MAPT_ARATH | 8.00E-59 | Microtubule-associated protein TORTIFOLIA1 |
| trEMBL | tr|A0A072URB3|A0A072URB3_MEDTR | 0 | Microtubule-associated TORTIFOLIA-like protein {ECO:0000313|EMBL:KEH31866.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00247 | 107973 | 111570 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.311 |
| SRR1783600 | control | 24.484 |
| SRR1783602 | moderate drought stress | 16.479 |
| SRR1811619 | moderate drought stress | 16.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.469 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.463 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.791 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.735 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.787 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.821 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.130 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.586 |
| SRR2868004 | Drought Stress (root) | 11.853 |
| SRR2967015 | Control (root) | 9.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.221 |
| SRR9715740 | Leaf | 4.646 |
| SRR9715741 | Leaf | 2.320 |
| SRR9715739 | Root | 6.336 |
| SRR9715742 | Root | 18.773 |
| SRR9715743 | Root | 17.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.601 |
| SRR8749028 | MeJA induced 9h | 3.195 |
| SRR8749029 | MeJA induced 9h | 2.322 |
| SRR8749030 | Uninduced | 0.307 |
| SRR8749031 | Uninduced | 0.210 |
| SRR8749032 | Uninduced | 0.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.155 |
| SRR8400027 | Control - Root | 33.233 |