Gene detail

Gene detail information of Glyur000246s00016999

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G55230.1	microtubule-associated proteins 65-1
NR	KHN23889.1	65-kDa microtubule-associated protein 1 [Glycine soja]
Swissprot	tr\|Q9FLP0\|MA651_ARATH	65-kDa microtubule-associated protein 1
trEMBL	tr\|I1M6L8\|I1M6L8_SOYBN	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA14G02180.1}

Sequence

Transcript Sequence

>Glyur000246s00016999.1
CTTGTGTGGGTCCATTTTCTTTCCCCGCACTGTACTCTCTCTGTCTTCTACACTGCACTCACTCATCCCCCTTCTCATAATCTATATCATATTCTTGCCACCGTTATATGCACATTACTCACAACACAACAACCACACTCACTGCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCACGAACGCACAGAAAAACACTCACACTGTTTCAGATCTGAAAGCTTCATAACCCTAAGCCTCACACGGCTGCATTGCTCTGGAACTTCAATGGCAGTAACTGAAGCTCAAAATCCTCTTATTGGAGAAAACACCTGTGGTTCGTTGTTGAAGAAGTTGCAGGAAATATGGGATGAGGTTGGTGAAAGTGACGAGGAACGGGACAAGATGCTGCTTCAGTTAGAGCAGGAGTGCTTGGACGTGTACAAGAGAAAGGTTGAACAGGCTGCAAAGTCAAGGGCACAGCTACTTCAAGCCTTATCAGATGCTAAGCTTGAGCTTTCTAGTCTTCTATCAGCTCTTGGAGAAAAGAGCTTTGCTGGAATTGAACAGCTTGCAGCTATAGCACCAGTACTTGAACAGTTATGGCAACAAAAGGAAGAAAGAATAAAGGAGTTCTCAGATGTACAGTCACAGATCCAAAAAATATGTGGAGAGATAGCTGGGAGCTTGAACCTTAGTGATGTTTCACCTGCCGTTGACGAGTCTGACCTGTCCCTGAAGAAGTTAGATGAATATCAATCTGAGCTCCAAGAACTTCAAAAGGAAAAGAGTGAGAGGTTGCAGAAGGTTCTTGAATTTGTGAGTACTGTGCATGATCTATGTGCTGTCCTTGGTATGGACTTCTTCAGTACTGTAACTGAGGTTCATCCAAGCCTAAACGATTCTACTGGTGTTCAATCCAAAAGCATTAGCAACGACACCCTAGCTAGGCTGGCTAAGACAGTCTTAACCCTGAAAGAAGATAAGAAGCAGAGGCTGCACAAGCTCCAAGAATTAGCTTCTCAGTTAATTGATCTGTGGAACCTAATGGATACCCATCCAGAGGAAAGGAAACTGTTTGACCATGTTACCTGTAACATGTCAGCTTCTGTTGATGAAGTCACTATTCCTGGTGCCCTTGCTCTGGATCTGATTGAGCAGGCTGAAGTGGAAGTTGAGAGACTTGACCAGCTGAAAGCCAGCAGGATGAAGGAAATTGCTTTCAAGAAGCAAGCAGAACTTGAAGAGATATTTGCCCGTGCTCATATAGAAATAGATCCAGAAACTGCCCGAGAGAAGATTATGGCATTGATTGATTCTGGTGACATTGAACCAGCCGAATTACTGGCTGACATGGACAATCAGATAGCAAAAGCGAAAGAAGAAGCTTTAAGCCGAAAAGATATATTGGACAAGGTTGAGAAATGGATGTCAGCATGTGAAGAAGAAAGTTGGCTTGAAGACTATAATCGGGATGAAAACAGGTATAATGCAAGCAGAGGTGCACACTTAAATCTCAAACGTGCAGAGAAAGCTCGGATACTGGTCAATAAAATTCCAGCTTTGGTTGATACATTGGTAGCTAAAACTCGTGCATGGGAACAAGATCATGACATGTCATTCACATATGATGGTGTTCCTCTTCTAGCCATGCATGAACGGGAAGAGGAAAAACGAAGGATGAGGGACCAGAAGAAGTATCATGAGCTGCAAAACACAGAACAAGAAGCGATCTTTGGTTCAAGACCCAGCCCTGGTAGGCCAGTTAGCAGCACTAAGAAGGTAGGAGGCCCTCGTACTAATGGAGGAGCCAATGGTACTCCTAACCGACGGCTATCACTTAATGCTCACCAAAATGGAAGCAGGTCCACATCGAAAGACGGAAAAAGGGATAACACTAGACCAGTTGCTCCTCTGAATTATGTGGCCATATCAAAAGAAGATGCTGCTTCCCACGTTTCTGGTACTGAACCCATGCCGGCATCACCCTAATAACGAGATCTTAATATCCAACCCCATAATTCATCTTTGTAGCATTGCCATATTACTAGTTTACTGCTTTAGGAGTATAAATCTGTGAGTGACAAGTAATTAGAGAGGAACTGGTCTGAGCTGTGTATGTTATAATATTGCCATTTGGAGGTTTTATAAATACATGTTGGCTTATTCCATTGAAGCCCTTTTAATATGGAAATATACACACTGGTAGTTTTGCCCCTCCCCCCACTTCAATCTATTCATTGGTTTGTTACCCTTTTCTTNTGTCTCTGTGCGGTCAAATACGGATTTCCGAATCTCTATAATCTCCTTTTGAGGACTCTCAGCAGTCAGCATGTCCCTGGTGATGGGAATTTCATAAATATTCAAGTCACGGTACAAGCAATAAAATTGTCAAATAGAGATTAAGAACCCNTTGGCCACTGACGTACGATGCTTCCTTTCCATAAACCCTTCATTCACATTGTTGCCTCTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00246	203637	208389	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0000226 microtubule cytoskeleton organization

GO:0000910 cytokinesis

molecular_function
GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000246s00016999.1	PF03999.7	MAP65_ASE1	37	536	5.30E-70

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	149.679
SRR1783600	control	150.715
SRR1783602	moderate drought stress	109.863
SRR1811619	moderate drought stress	108.867

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	139.497
DRR006520	Root Summer glycyrrhizin high producing strain	137.689
DRR006521	Root Winter glycyrrhizin high producing strain	7.265
DRR006522	Root Winter glycyrrhizin high producing strain	7.019
DRR006523	Root Summer glycyrrhizin low producing strain	95.827
DRR006524	Root Summer glycyrrhizin low producing strain	96.675
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.230
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.177

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	65.439
SRR2868004	Drought Stress (root)	42.854
SRR2967015	Control (root)	55.030

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.408
SRR9715740	Leaf	7.678
SRR9715741	Leaf	7.621
SRR9715739	Root	14.070
SRR9715742	Root	60.733
SRR9715743	Root	52.215

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	112.998
SRR8749028	MeJA induced 9h	38.310
SRR8749029	MeJA induced 9h	59.875
SRR8749030	Uninduced	4.246
SRR8749031	Uninduced	0.878
SRR8749032	Uninduced	5.854

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	91.176
SRR8400027	Control - Root	86.941