Gene detail information of Glyur000246s00016968.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007146520.1 | 2.90E-18 | hypothetical protein PHAVU_006G047800g [Phaseolus vulgaris] |
| Swissprot | tr|O80339|ERF82_ARATH | 2.00E-08 | Ethylene-responsive transcription factor 3 |
| trEMBL | tr|V7BKJ7|V7BKJ7_PHAVU | 1.00E-18 | Uncharacterized protein {ECO:0000313|EMBL:ESW18514.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00246 | 28367 | 28678 | + |
Gene family
| Gene family | subfamily |
|---|---|
| EAR motif-containing Proteins | other |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 178.692 |
| SRR1783600 | control | 178.834 |
| SRR1783602 | moderate drought stress | 114.064 |
| SRR1811619 | moderate drought stress | 118.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 328.328 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 326.025 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 163.473 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 155.620 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 774.316 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 771.285 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 92.671 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 89.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.670 |
| SRR2868004 | Drought Stress (root) | 97.357 |
| SRR2967015 | Control (root) | 145.656 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 358.570 |
| SRR9715740 | Leaf | 368.483 |
| SRR9715741 | Leaf | 365.850 |
| SRR9715739 | Root | 518.108 |
| SRR9715742 | Root | 409.905 |
| SRR9715743 | Root | 420.608 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 414.973 |
| SRR8749028 | MeJA induced 9h | 266.855 |
| SRR8749029 | MeJA induced 9h | 469.438 |
| SRR8749030 | Uninduced | 329.469 |
| SRR8749031 | Uninduced | 277.413 |
| SRR8749032 | Uninduced | 587.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 121.160 |
| SRR8400027 | Control - Root | 185.327 |