Gene detail information of Glyur000245s00014710 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN18764.1 | 1.51E-33 | F-box/kelch-repeat protein, partial [Glycine soja] |
| trEMBL | tr|A0A072UCE0|A0A072UCE0_MEDTR | 6.00E-32 | F-box protein interaction domain protein {ECO:0000313|EMBL:KEH27126.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00245 | 217843 | 221730 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.625 |
| SRR1783600 | control | 0.632 |
| SRR1783602 | moderate drought stress | 1.113 |
| SRR1811619 | moderate drought stress | 1.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.733 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.996 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.662 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.733 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.211 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.480 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.188 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.254 |
| SRR2868004 | Drought Stress (root) | 9.975 |
| SRR2967015 | Control (root) | 9.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.033 |
| SRR9715741 | Leaf | 0.068 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.003 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.862 |
| SRR8749028 | MeJA induced 9h | 4.199 |
| SRR8749029 | MeJA induced 9h | 6.687 |
| SRR8749030 | Uninduced | 5.396 |
| SRR8749031 | Uninduced | 6.268 |
| SRR8749032 | Uninduced | 2.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.885 |
| SRR8400027 | Control - Root | 3.545 |