Gene detail information of Glyur000245s00014709 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16210.1 | 1.00E-05 | F-box family protein |
| NR | XP_004498527.1 | 8.56E-61 | PREDICTED: F-box/kelch-repeat protein At3g06240-like [Cicer arietinum] |
| Swissprot | tr|Q9LU24|FB145_ARATH | 6.00E-08 | Putative F-box protein At3g16210 |
| trEMBL | tr|A0A072US98|A0A072US98_MEDTR | 1.00E-56 | F-box protein interaction domain protein {ECO:0000313|EMBL:KEH32226.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00245 | 217008 | 217668 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.074 |
| SRR1783600 | control | 0.019 |
| SRR1783602 | moderate drought stress | 1.143 |
| SRR1811619 | moderate drought stress | 1.354 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.251 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.100 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.171 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.872 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.555 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.703 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.381 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.399 |
| SRR2868004 | Drought Stress (root) | 3.039 |
| SRR2967015 | Control (root) | 3.580 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.038 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.196 |
| SRR8749028 | MeJA induced 9h | 3.741 |
| SRR8749029 | MeJA induced 9h | 1.248 |
| SRR8749030 | Uninduced | 2.265 |
| SRR8749031 | Uninduced | 2.163 |
| SRR8749032 | Uninduced | 1.336 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.756 |
| SRR8400027 | Control - Root | 1.080 |