Gene detail information of Glyur000245s00014702 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77610.1 | 5.00E-145 | EamA-like transporter family protein |
| NR | XP_003542929.1 | 0 | PREDICTED: UDP-galactose transporter 1 [Glycine max] |
| Swissprot | tr|Q9C521|UGAL1_ARATH | 0 | UDP-galactose transporter 1 |
| trEMBL | tr|I1MA32|I1MA32_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G23570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00245 | 168342 | 173169 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000245s00014702.1 | PF00892.15 | EamA | 22 | 121 | 3.40E-07 |
| Glyur000245s00014702.1 | PF03151.11 | TPT | 131 | 273 | 1.20E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.647 |
| SRR1783600 | control | 8.440 |
| SRR1783602 | moderate drought stress | 6.605 |
| SRR1811619 | moderate drought stress | 6.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.616 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.117 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.308 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.138 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.203 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.935 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.976 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.207 |
| SRR2868004 | Drought Stress (root) | 16.860 |
| SRR2967015 | Control (root) | 16.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.652 |
| SRR9715740 | Leaf | 8.442 |
| SRR9715741 | Leaf | 8.800 |
| SRR9715739 | Root | 15.990 |
| SRR9715742 | Root | 13.808 |
| SRR9715743 | Root | 12.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.880 |
| SRR8749028 | MeJA induced 9h | 10.136 |
| SRR8749029 | MeJA induced 9h | 5.190 |
| SRR8749030 | Uninduced | 2.376 |
| SRR8749031 | Uninduced | 1.015 |
| SRR8749032 | Uninduced | 1.311 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 21.942 |
| SRR8400027 | Control - Root | 23.991 |