Gene detail information of Glyur000245s00014701 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77600.1 | 5.00E-104 | ARM repeat superfamily protein |
| NR | XP_004516750.1 | 0 | PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|A0A072VH41|A0A072VH41_MEDTR | 0 | Sister chromatid cohesion PDS5-like protein {ECO:0000313|EMBL:KEH40901.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00245 | 161539 | 165016 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.187 |
| SRR1783600 | control | 1.227 |
| SRR1783602 | moderate drought stress | 1.217 |
| SRR1811619 | moderate drought stress | 1.195 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.442 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.473 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.051 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.078 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.496 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.563 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.507 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.934 |
| SRR2868004 | Drought Stress (root) | 3.967 |
| SRR2967015 | Control (root) | 3.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.667 |
| SRR9715740 | Leaf | 0.503 |
| SRR9715741 | Leaf | 0.749 |
| SRR9715739 | Root | 0.156 |
| SRR9715742 | Root | 0.659 |
| SRR9715743 | Root | 0.395 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.208 |
| SRR8749028 | MeJA induced 9h | 2.739 |
| SRR8749029 | MeJA induced 9h | 0.200 |
| SRR8749030 | Uninduced | 0.004 |
| SRR8749031 | Uninduced | 0.026 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.538 |
| SRR8400027 | Control - Root | 4.344 |