Gene detail information of Glyur000245s00014699 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G77600.2 | 9.00E-137 | ARM repeat superfamily protein |
| NR | XP_006593595.1 | 0 | PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like isoform X3 [Glycine max] |
| trEMBL | tr|K7LX49|K7LX49_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G03241.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00245 | 147149 | 161508 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.937 |
| SRR1783600 | control | 3.836 |
| SRR1783602 | moderate drought stress | 4.088 |
| SRR1811619 | moderate drought stress | 4.073 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.559 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.402 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.300 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.281 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.509 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.526 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.282 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.183 |
| SRR2868004 | Drought Stress (root) | 4.405 |
| SRR2967015 | Control (root) | 3.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.821 |
| SRR9715740 | Leaf | 2.246 |
| SRR9715741 | Leaf | 1.720 |
| SRR9715739 | Root | 0.207 |
| SRR9715742 | Root | 1.340 |
| SRR9715743 | Root | 0.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.653 |
| SRR8749028 | MeJA induced 9h | 5.207 |
| SRR8749029 | MeJA induced 9h | 4.402 |
| SRR8749030 | Uninduced | 1.872 |
| SRR8749031 | Uninduced | 1.303 |
| SRR8749032 | Uninduced | 1.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.610 |
| SRR8400027 | Control - Root | 4.717 |