Gene detail information of Glyur000245s00014687 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G21810.1 | 5.00E-85 | Plant protein of unknown function (DUF869) |
| NR | XP_004498341.1 | 0 | PREDICTED: LOW QUALITY PROTEIN: filament-like plant protein 1-like [Cicer arietinum] |
| Swissprot | tr|Q8LLE5|FPP_SOLLC | 2.00E-142 | Filament-like plant protein (Fragment) |
| trEMBL | tr|A0A072VGG6|A0A072VGG6_MEDTR | 0 | Filament-like plant protein {ECO:0000313|EMBL:KEH40528.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00245 | 88190 | 91821 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000245s00014687.1 | PF05911.6 | DUF869 | 149 | 330 | 1.20E-68 |
| Glyur000245s00014687.1 | PF05911.6 | DUF869 | 369 | 452 | 2.20E-18 |
| Glyur000245s00014687.1 | PF05911.6 | DUF869 | 598 | 726 | 1.50E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.678 |
| SRR1783600 | control | 0.700 |
| SRR1783602 | moderate drought stress | 0.428 |
| SRR1811619 | moderate drought stress | 0.394 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.525 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.519 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.089 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.089 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.168 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.538 |
| SRR2868004 | Drought Stress (root) | 4.575 |
| SRR2967015 | Control (root) | 4.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.745 |
| SRR9715740 | Leaf | 2.662 |
| SRR9715741 | Leaf | 1.196 |
| SRR9715739 | Root | 0.040 |
| SRR9715742 | Root | 0.612 |
| SRR9715743 | Root | 0.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.590 |
| SRR8749028 | MeJA induced 9h | 1.508 |
| SRR8749029 | MeJA induced 9h | 0.516 |
| SRR8749030 | Uninduced | 0.615 |
| SRR8749031 | Uninduced | 0.031 |
| SRR8749032 | Uninduced | 0.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.947 |
| SRR8400027 | Control - Root | 2.999 |