Gene detail

Gene detail information of Glyur000245s00014680

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G01720.1	4.00E-31	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
NR	XP_004502479.1	2.34E-60	PREDICTED: NAC domain-containing protein 2-like [Cicer arietinum]
Swissprot	tr\|Q39013\|NAC2_ARATH	2.00E-39	NAC domain-containing protein 2
trEMBL	tr\|C7AFG2\|C7AFG2_CICAR	9.00E-61	NAC family transcription factor 5 {ECO:0000313\|EMBL:ACS94038.1}

Sequence

Transcript Sequence

>Glyur000245s00014680.1
ATGACTTATCTCCTCGATGATTGGGTGCTTTGTCGCATTTACAACAAGAAAGGCATCGTTGAGAAGCAACCGAACAATAACCGAAAAATGGAATGCTTCGAAACGGAGGACAAGAAGCCGGAGATTCTGGCAAACGGTGGAGCGCTTTTCCCTCCGCTGCCGCCGCCGCTTGCGACGGCGCAGGCGATGGATTGCGTGTACTTTGACACNTCCGACTCGGTACCGAAGCTGCACACGACGGACTCTAGCTGTTCCGAGCACGTTGTGTCGCCGGAGTTCGCTAATAGCGAGGTGCAGAGCGAGCCCAAGTGGAATGAGAAAAACGCCCTCGATTTTCCCTATAATTACGTGGATACCACTTTCGGTTCCCAGTTCCAGAGNGGTAATAATCAGATGTCGCCGCTGCAGGATATCTTCATGTACCTCTCCAAGCCCTTTTGAAAATTATTGGGCACAAGTTTTTGCAAGTGAGTGGATTGCATTAATGCACGGTGGCACGAGACTCTTATTGAAAGGTCCATGAGTGTGCCCGTGCTAGTGCATCCGTAGGTGATCATTATTTAAATGAAAAGATGAAGAGATTCTAACGTGAACAAATGTGTTTTGAAATTTGAGTTTATTAAGTTAATAAAATAATTTAACACATCATTAAAATAACAATGATAGATATTTATCCATTAGTGATGTGTTAATAATTTTATTAATTTAATAAATACTTAAATTTTGATACATTGTTCGTGTAAGGATTCAGCTGTCGCTATTGGTCATTAATTTAGGTAGGACAAGGAAAAAATACAAGAATTGAACCGGGTTGTATATCAGGTGTATCATGCACCGAATGATTTGGTGTGTGTTGTTCCAAGGGTGCATATTGTAGGAATCTTCTCTCTTAATTAGGATTAGGTATAGTGTACTGCTTGTAGGTATGTATAAATTAGCATGCGTATATATGTAGATGTAATGATCAGTCCATGTTATGGAAGTCGAATTCGAACCATCTAATTAATATTAGTATCAAATG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00245	57312	58379	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.536
SRR1783600	control	0.539
SRR1783602	moderate drought stress	1.123
SRR1811619	moderate drought stress	1.114

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.828
DRR006520	Root Summer glycyrrhizin high producing strain	5.025
DRR006521	Root Winter glycyrrhizin high producing strain	16.210
DRR006522	Root Winter glycyrrhizin high producing strain	17.510
DRR006523	Root Summer glycyrrhizin low producing strain	36.326
DRR006524	Root Summer glycyrrhizin low producing strain	35.898
DRR006525	Leaf Summer glycyrrhizin high producing strain	64.001
DRR006526	Leaf Summer glycyrrhizin high producing strain	65.336

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.401
SRR2868004	Drought Stress (root)	25.350
SRR2967015	Control (root)	16.412

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	179.545
SRR9715740	Leaf	76.895
SRR9715741	Leaf	189.792
SRR9715739	Root	11.520
SRR9715742	Root	15.585
SRR9715743	Root	16.950

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	81.346
SRR8749028	MeJA induced 9h	119.223
SRR8749029	MeJA induced 9h	55.291
SRR8749030	Uninduced	15.120
SRR8749031	Uninduced	9.915
SRR8749032	Uninduced	11.005

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	27.645
SRR8400027	Control - Root	9.892