Gene detail

Gene detail information of Glyur000245s00014677

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21730.1	0	P-loop containing nucleoside triphosphate hydrolases superfamily protein
NR	XP_006575170.1	0	PREDICTED: centromere-associated protein E-like isoform X1 [Glycine max]
Swissprot	tr\|Q8S950\|NACK1_TOBAC	1.00E-58	Kinesin-like protein NACK1
trEMBL	tr\|K7K8V3\|K7K8V3_SOYBN	0	Kinesin-like protein {ECO:0000256\|RuleBase:RU000394}

Sequence

Transcript Sequence

>Glyur000245s00014677.1
ATGTCTTCCTCCGCCGGCTACACCCGCTTTTCCTCCCAAAGAGCCTCCGCCACCGTCTCACCCCTCCGGTCAAGGAAGTCACCGGCGCCCGTCGTAAAACCCGGCGTAAGGCCCACAACTCCGTCGTCCTCTTCGGCGTTGTCGAGGCCCCCCGCCGCCTTCTCCTCTGACGTCAGCAACAGCAAGGCCAAGGAGAACGTCACTGTCACCGTCCGGTTCCGACCTCTCAGTAACAGAGAAATTAGTAAAGGGAATGAGGTGGCGTGGTACGCGGATGGAGACCGTGTAGTGAGAAATGAGTACAATCCTTCTCTTGCTTATGGCTTCGATAAGGTATTTGGGCCTGCAACAACAACTAAACATGTTTATGATGTGGCTGCTCTGCATGTTGTAAGCGGTGCCATGGAAGGGATCAATGGTACTGTTTTTGCATATGGTGTTACTAGTAGTGGCAAGACTCACACAATGCATGGGGAGCAAAAGTCACCAGGAATAATCCCTCTCGCTGTGAAGGATGTTTTTAGTATTATACAGGAGGTCATTAACGACTTGCTGGATCCACTTGGGCAGAACCTAAGAATACGAGAGGATGCTCAGGGGACGTATGTTGAAGGAATCAAAGAGGAAGTTGTGCTATCCCCTGCTCATGCCCTTTCTTTGATTGCTACAGGAGAAGTTTCTGGAATAATGCAGAGCATAGACATTCCCAAATATTGCTTTGATGACTTTTTGGCTGCTCAGAAGCCACACCAAACAGCCAATTCCCGAATGTTTGACAGATATGAGACTATNGAAAGCAGTTCGCGAGGGGAAAATATAGAGGAAGAGGATGTGACATTGTCCCACCTGCACTTAATTGATCTTGCAGGATCTGAAAGTTCTAAAACTGAGACTATTGGTTTGCGAAGGAAAGAGGGTTCCTATATTAATAAAAGTTTGCTTACTCTTGGAACGGTGATTGCTAAATTAACAGATGGGAAGGCAACTCATATTCCTTATCGAGATTCAAAGCTCACACGGTTGTTGCAATCATCCCTTAGTGGCCACGGACGCATTTCTCTCATTTGCACAGTTACTCCTGCCTCTAGCAGTAGTGAAGAGACACATAACACATTAAAATTTGCACACCGGAGTAAGCATGTTGAAATCAAGGCCTCGCAAAATAAGATTATGGATGAGAAGTCTCTGATCAAAAAGTATCAGAGGGAAATTTCTGAGTTAAAGCAGGAGCTTGAGCAGTGGAAGCGTGGCATGATTGAGAATCCCAATATGGCCACATCTTCACAAGAAGATTTGGTTACTNTGAAGCTTCAGCTTGAAGCTGGCCAATCCAAATTGAAGTCAAGATTGGAAGAGGAGGAACAAGCTAAAGCAGCATTGATGGGAAGAATTCAGCGACTAACCAAATTAATCTTGGTCTCTACAAAGAATGCAATGTCATCAAGCATTCCTGAAAGGCCTAGCCATATGCGAAGGCATTCTTTTGGGGAAGATGAGCTAGCATATTTGCCAGATAGAAAACGTGAGTCCTTAATTGATGATGACGCCGGGAGCCATGCTTCAGTTCCTTCAGTGGAAGAAAAGGATGATGTTACCAATTTAGATGAATTGGTCAAAGATTATAAAAGGAACAAAAGACGTGGAATGCTTGGTTGGTTGAAGCTGAGAAAACCTGATAATCTTGATGGATTATCGCCAAATGTTGACAGTGAGGGCTCTGCAAATGGGTCACCAGCATCTGATTCAAAATTATCGCCAAATAGAGTTATGCATTGTGATATGAAGGATTCACGCAGGAATTCAGTCGGCAAAAAGGATAATGCTTCAGCTGTCAATTCTTTTCCGGGAAAAACTCAAGCAGGTGACTTGTTCAGTGCAACTGTTGGAGGTCGTCAACTTCCTCCGACTGGGACCACTGTTACAGATCAAATGGATCTTCTTCGTGAACAAGAGGACATGCATAAGCTGAAGGGTGAAATCAGCCAAAAGAAGAATCAAATCCGTATTCTGGAGCAACGGATGATTGGGTCACTAGGACATGCACCAAGTAACAGCGAAATGTCTCAGGCTCTATCCAAGCTTACCTCTGAGCTCAGTCAAAAGATTTTCGAACTTGAGATCAAGTCAGCCGACAATCGGATACTTCAAGAGCAACTACAGTTGAAGAATTCGGAGAATGCTGGGATGCAAGAGACAGTTCTTTCTCTAAGGAAACAGATAGATTTGTTGCTGGATAAAACCTCAACTAATTCTCAGCAGTTTGCTGATAGTGAGACTGACAGTCCTAAAGAGATATTGGGAAAGACTGACGAAAAACAGGCAGTCAAAAACCTGAATGCAACAGTTTCTCAAGAACACTTAGGGCAGGGAAGTACTGATTCAATTGTAAATTCCCAAATTCTTGAGCAGGCAGCTGAAATAGAGAATTTAAGGCAAGAGAATGTGAGATTGGTTGAAGAGAAAGAGAGGTTTGAAATTCAAAGCCAGAAGCTTGCAGAGGAAGCTTCATATGCAAAGGAGTTGGCAGCAGCTGCTGCAGTTGAACTCCAAAACCTGGCTGAACAAGTAACTAAACTTACTTATGAAAATGCAGAACTCAGTGGTGATCTGGCAGCTGCAAAAGAAGCCTGTTGCAAATCTAACTTTTGTCAGATATCTGCATATGATTGCATGCAAAATATCAATAATAGTTTTCAACGAGATGGCCAATTAAAAAAGCTTGGGAATGAAATTCGTATTGAGGAGTTGCAGAAGGACCTTTATGCTAGATTCCAAAGAGAAGCTGCATTAGAAGCAGCTCTATCTGTGAAAGATGAAATAGAAGCTGACCTAAGGAGGACACTTGATGAAATAGAACACCAAAAACAAGATATGGAATATGAGCTTACAAGCATGCGGATGCTGGTAGCAAACATGAGAAAGACTGGCATTAATATTGAGGATAAGTCAACAGTTCATATGCCTAATGATGTACAAACCAAGGTTAAAAATAGACTTGCCCCTTCTAATGGTCACTCTTTTAGAAAACAATACAAAGAGGTTGAAACTTTAGGAAACATGGAAGATATGATTGCATTGGAAGAACTAAAGGCTAGTTATCCAAGAGAAAGAAGAAGATGCAAAGAACTAGAAAGCCATATTTCTAGATTGAAGGGTGAAGACATTGCTGGTCTGGATGTAATGGCCCTTGAAGAGCTTCAAAACCTTCATATTGACGCAATAACAAAGATTTGCCATGCAAAGTATGCAAATCAAAACATATAGCATCTTACTATTGGATGCGGTGAGTATTAGACAGGAGTTTTGAAGTTGGCATCAATCCATAGAAATATGGTACATCAGGAATTATGTTCCTAATTAACCAAGTATGAACTTTATTTCAAGTACAGTATATTTTGTACACTTACAAAATACTGACAACCACCTCTCAGTCATCCTTGTGCTGGTGTGTGGAAGGGACAGTGAAGGTGCATCCTCTAGCAAAGATGGGAATTTAGGCCCCTCTTCATGAATTTTTGTCTAGCAAGGATTACTTGTTCAGTATCTTGTGTGGTTGGAACTTGGAAGCTATCATTTACAAATTCATTAATTGTAGCTTATGAAGCATAAAATATTGTAGTAAGCTGACAAAAAATCTATGTATATATGTTGTACCATATGGAATTATATATGCTATCCAATTTATCCAAACATCCTCTGCCAAGCAACTTATTGACCATCTGTTACTTAAGAAGATACAGGGCACCGGTCCTCAAAGATACCCAAATCGGCTGCATATGGGTGTNGAAAACCACCTTCAAAATCACGATCCATACTGTTAATGAACAATGGGGTTAAAAATCCTTGTAAGATTTATTGGCCTTCAAAATTACAGAAGAAATCAAAAGATATATAGATAGGTTTATGACTTGGGAAGCCTGTCACAATTGGAAGAGACCCATCCAATCTGCTGTCTCTCATTGTCATAAATCACCATTTTATCTTGTAAAGAGATGTCTGTTGAGAGAAAAAGGAAGTATATTACCATCAAATTATCAAATAAAGAAAGGAAAAGAAAAGTGGGTTTGCTTATATTCTGTTGGCATTTGCATGCCTTACCTCCTATTATGTTAAGATTTCCTAATCCTACTTCAGTGCCATCCAGAATCCCCAAGCAAACATTGCCATGTTTCTGGAAAAGGACACCATGCAAGACTTAGTTTAATTTATTCCCTTCACTAAAGAGGCAGGGAAGTTGCTCGTAGTCTAAAAAAGGTGCTCACAGTGACGATGAGATAAGCTTCTGGTGGTATTAACATCTGCAAATTCTTCATTTTTGTGAATCTCAATGCTAGGGGCTTGAAATAGTTTCTGACATCACTTACAGATTTGAAAGAATTTGCACCCTTCCAACAAATTGGAAGTGATGGATCCTCAGTGGCTCTTTTCAACTGTTTTCCCTTTAAATCTTTAACTACCTGAATTATGGATCAAGGCTTATTAACTGAAGATGGCAGAATACTTATCTTTAGGCCATATAAAGCAATGGAATTGATGAATATATTATTGAGGCTCTCATGTCTCCATCTTACCAGGTCAACAATATCTTGGTAAGCTTGGGAATTTAAGTATGTGTAAGAGCTCCCACTATCAAAAATAAGTTCGAGACCCTTAACAGAAGTAGTCTTTCCATTGAAAAGCAGTTCCACGGGTCCTAAACTGTAGTGTTTTCTGAAGGAATGATCAAATGGAAGTTCCCATGAGTGGAAATAAATGATACATGTATGAAACTTAAACATCTCAGAAGAAAACAGATAACATTATTTAAAACTTACTCAGAAGAACTAGGTAACATGGGTGTCCAAACAACTCCTGATTGGGGAATGAGATCATCTCCAAAGAATAAAAACCCTCCTCCTCGACTACTTAAGCAATGGCCAACGACATTGCGAATCAGACCCAGAGAGTGAAGCTGGGACAAAATGCTTGCTCTGCCATTGCCAAGGCCAAGGACTCCTGCCGTAGAAGGTGGGGAGGTAGGACTGGAATACTTTTGATCATATCCACACCTAGCCATGCATCAGTGAAAGAAACTCTCAAATCTCAATCATTCACAAAGGTTAATAGGACATTGTGTTGAGGAGTTCAGGGGACCTTATCAGTGGGTTAAGTAACATATTAAGAGACCTCGACACCACATTTCCTCCCAAAACCTTAAGGCATTAGATATATAGATCTTGTCTCTCATATATTATTTCATTTAGCCCTTCAACTCCCACTTGAATTCCCAAGACATTGTTGTTCCAAGTTGAAGCCATGGCAACATTTTTCCTCAACAGATCAATTCTGTTATGT

Protein Sequence

>Glyur000245s00014677.1
MSSSAGYTRFSSQRASATVSPLRSRKSPAPVVKPGVRPTTPSSSSALSRPPAAFSSDVSNSKAKENVTVTVRFRPLSNREISKGNEVAWYADGDRVVRNEYNPSLAYGFDKVFGPATTTKHVYDVAALHVVSGAMEGINGTVFAYGVTSSGKTHTMHGEQKSPGIIPLAVKDVFSIIQEVINDLLDPLGQNLRIREDAQGTYVEGIKEEVVLSPAHALSLIATGEVSGIMQSIDIPKYCFDDFLAAQKPHQTANSRMFDRYETXESSSRGENIEEEDVTLSHLHLIDLAGSESSKTETIGLRRKEGSYINKSLLTLGTVIAKLTDGKATHIPYRDSKLTRLLQSSLSGHGRISLICTVTPASSSSEETHNTLKFAHRSKHVEIKASQNKIMDEKSLIKKYQREISELKQELEQWKRGMIENPNMATSSQEDLVTXKLQLEAGQSKLKSRLEEEEQAKAALMGRIQRLTKLILVSTKNAMSSSIPERPSHMRRHSFGEDELAYLPDRKRESLIDDDAGSHASVPSVEEKDDVTNLDELVKDYKRNKRRGMLGWLKLRKPDNLDGLSPNVDSEGSANGSPASDSKLSPNRVMHCDMKDSRRNSVGKKDNASAVNSFPGKTQAGDLFSATVGGRQLPPTGTTVTDQMDLLREQEDMHKLKGEISQKKNQIRILEQRMIGSLGHAPSNSEMSQALSKLTSELSQKIFELEIKSADNRILQEQLQLKNSENAGMQETVLSLRKQIDLLLDKTSTNSQQFADSETDSPKEILGKTDEKQAVKNLNATVSQEHLGQGSTDSIVNSQILEQAAEIENLRQENVRLVEEKERFEIQSQKLAEEASYAKELAAAAAVELQNLAEQVTKLTYENAELSGDLAAAKEACCKSNFCQISAYDCMQNINNSFQRDGQLKKLGNEIRIEELQKDLYARFQREAALEAALSVKDEIEADLRRTLDEIEHQKQDMEYELTSMRMLVANMRKTGINIEDKSTVHMPNDVQTKVKNRLAPSNGHSFRKQYKEVETLGNMEDMIALEELKASYPRERRRCKELESHISRLKGEDIAGLDVMALEELQNLHIDAITKICHAKYANQNI

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00245	12797	27215	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0007018 microtubule-based movement

cellular_component
GO:0005871 kinesin complex

molecular_function

GO:0003777 microtubule motor activity

GO:0005524 ATP binding

GO:0008017 microtubule binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000245s00014677.1	PF00225.18	Kinesin	72	381	2.20E-70

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.637
SRR1783600	control	2.664
SRR1783602	moderate drought stress	3.434
SRR1811619	moderate drought stress	3.474

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	5.551
DRR006520	Root Summer glycyrrhizin high producing strain	5.371
DRR006521	Root Winter glycyrrhizin high producing strain	3.606
DRR006522	Root Winter glycyrrhizin high producing strain	3.577
DRR006523	Root Summer glycyrrhizin low producing strain	7.109
DRR006524	Root Summer glycyrrhizin low producing strain	6.987
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.817
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.891

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	7.635
SRR2868004	Drought Stress (root)	8.007
SRR2967015	Control (root)	8.602

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.569
SRR9715740	Leaf	5.183
SRR9715741	Leaf	3.594
SRR9715739	Root	0.716
SRR9715742	Root	3.116
SRR9715743	Root	2.478

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	6.012
SRR8749028	MeJA induced 9h	5.822
SRR8749029	MeJA induced 9h	4.817
SRR8749030	Uninduced	3.770
SRR8749031	Uninduced	2.167
SRR8749032	Uninduced	1.638

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	12.084
SRR8400027	Control - Root	11.271