Gene detail information of Glyur000244s00014814 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G57950.1 | 2.00E-20 | |
| NR | XP_003625246.1 | 7.80E-84 | hypothetical protein MTR_7g093040 [Medicago truncatula] |
| trEMBL | tr|G7KVC2|G7KVC2_MEDTR | 3.00E-84 | DUF761 domain protein {ECO:0000313|EMBL:AES81464.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00244 | 126947 | 127579 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000244s00014814.1 | PF05553.6 | DUF761 | 175 | 209 | 1.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.750 |
| SRR1783600 | control | 5.769 |
| SRR1783602 | moderate drought stress | 13.658 |
| SRR1811619 | moderate drought stress | 13.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.344 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.193 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.411 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.623 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.701 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.430 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.741 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.609 |
| SRR2868004 | Drought Stress (root) | 10.723 |
| SRR2967015 | Control (root) | 19.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 26.444 |
| SRR9715740 | Leaf | 45.071 |
| SRR9715741 | Leaf | 35.284 |
| SRR9715739 | Root | 4.981 |
| SRR9715742 | Root | 7.755 |
| SRR9715743 | Root | 9.126 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.366 |
| SRR8749028 | MeJA induced 9h | 34.057 |
| SRR8749029 | MeJA induced 9h | 4.416 |
| SRR8749030 | Uninduced | 23.577 |
| SRR8749031 | Uninduced | 1.602 |
| SRR8749032 | Uninduced | 1.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.138 |
| SRR8400027 | Control - Root | 7.404 |