Gene detail

Gene detail information of Glyur000244s00014794

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06720.1	7.00E-133	peroxidase 2
NR	XP_007162335.1	0	hypothetical protein PHAVU_001G143300g [Phaseolus vulgaris]
Swissprot	tr\|Q42578\|PER53_ARATH	6.00E-166	Peroxidase 53 (Precursor)
trEMBL	tr\|V7CW37\|V7CW37_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW34329.1}

Sequence

Transcript Sequence

>Glyur000244s00014794.1
AATCACTCAAATTAACCAGCACAATAGGGAAGAAGATACAATTAAGAGGCCAAAATCATGCTTTGTTCAACTCCTTATTCCCTACTCGCCACCATTTTCGCAGCTCTAATTATGTTCCTTCTTTGTCCGTCAAATGCTCAATTGAGCTCCACCTTCTACTCCAGCACGTGCCCCAACGTGTCTTCCATCGTGAGAAGTGTTATTCAGCAGGCTCTGCAATCTGATTCTCGCATTGCCGCAAGCCTAACCCGTCTTCAATTTCATGATTGCTTTGTTAATGGATGTGATGCATCGCTTCTGTTAGATCAGGGTGGCAACATAACGCTGAGCGAGAAAAATGCANCTCCAAACAATAATTCCGCTCGTGGCTTTAATGTAGTTGACAACATCAAAACCTCTATCGAAAATTCATGCCCCGGTGTCGTTTCTTGTGCTGATATACTTGTTCTGGCTGCTGAAGCTTCCGTGTCTTTGTCAGGAGGTCCCTCATGGAATGTGCTACTTGGGAGAAGGGACGGTGTGATAGCAAACCAATCTGGTGCCAACAATTCCATTCCCGCTCCAACTGAAAGCCTAGCCAATGTAACAGCCAAATTTGCTGCCGTTGGCTTAAACACAACTGATCTCGTTGCATTATCTGGTGCACATACTTTTGGTCGTGCCCAATGTAGATTTTTCAACCAGAGNCTATTCAACTTCAGTGGCACTGGTAGCCCTGATCCAACGCTGAATTCAACATACCTGGCTACCCTGCAGCAAAATTGTCCACAAAATGGAAGCGGGACCACTCTGAACAANCTTGACCCTTCATCCCCAGATAGTTTTGATAACAACTACTTCAAAAACCTCCTCAACAATCAGGGGCTTCTCCAAACAGACCAAGAGCTGTTTTCTTCCACTAATGGCTCTGCCACATTTGCCTCCATTGTTAACAACTTTGCCAGCAACCAAACAGCCTTCTTCGAAGCCTTTGTTCAGTCCATGATTAATATGGGTAATATTAGCCCATTAACAGGAAGTCAAGGAGAAATCAGATCCGATTGTAAGAAAGTGAATGGAAGTTGAAAATGAGGAGGATCAATCACCATGATGAGGCACTGCACAAGCTATTCTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00244	15825	17756	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000244s00014794.1	PF00141.18	peroxidase	45	296	2.40E-73

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	48.963
SRR1783600	control	49.800
SRR1783602	moderate drought stress	68.937
SRR1811619	moderate drought stress	68.977

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.670
DRR006520	Root Summer glycyrrhizin high producing strain	7.389
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	5.746
DRR006524	Root Summer glycyrrhizin low producing strain	5.571
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.761
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.787

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	124.934
SRR2868004	Drought Stress (root)	133.328
SRR2967015	Control (root)	131.554

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.579
SRR9715740	Leaf	2.295
SRR9715741	Leaf	2.091
SRR9715739	Root	5.240
SRR9715742	Root	69.034
SRR9715743	Root	47.790

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.012
SRR8749029	MeJA induced 9h	0.054
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	192.755
SRR8400027	Control - Root	284.651