Gene detail information of Glyur000243s00013146 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01470.1 | 5.00E-56 | Late embryogenesis abundant protein |
| NR | KHN40443.1 | 1.92E-90 | Desiccation protectant protein Lea14 like [Glycine soja] |
| COG | YP_001341781.1 | 6.00E-08 | late embryogenesis abundant protein 2 [Marinomonas sp. MWYL1] |
| Swissprot | tr|P46519|LEA14_SOYBN | 1.00E-92 | Desiccation protectant protein Lea14 homolog |
| trEMBL | tr|C6T1L4|C6T1L4_SOYBN | 1.00E-90 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G47361.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00243 | 192227 | 193895 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000243s00013146.1 | PF03168.8 | LEA_2 | 44 | 140 | 1.20E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 136.609 |
| SRR1783600 | control | 135.738 |
| SRR1783602 | moderate drought stress | 91.416 |
| SRR1811619 | moderate drought stress | 90.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 207.460 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 203.434 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1357.195 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1318.757 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 434.679 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 431.224 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 65.514 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 66.207 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 202.213 |
| SRR2868004 | Drought Stress (root) | 184.511 |
| SRR2967015 | Control (root) | 245.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 404.729 |
| SRR9715740 | Leaf | 308.517 |
| SRR9715741 | Leaf | 392.993 |
| SRR9715739 | Root | 463.507 |
| SRR9715742 | Root | 510.648 |
| SRR9715743 | Root | 481.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 636.082 |
| SRR8749028 | MeJA induced 9h | 500.744 |
| SRR8749029 | MeJA induced 9h | 711.791 |
| SRR8749030 | Uninduced | 651.738 |
| SRR8749031 | Uninduced | 233.366 |
| SRR8749032 | Uninduced | 392.531 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 175.564 |
| SRR8400027 | Control - Root | 181.236 |