Gene detail

Gene detail information of Glyur000243s00013140

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G67090.1	4.00E-145	Subtilisin-like serine endopeptidase family protein
NR	XP_003624105.1	0	Xylem serine proteinase [Medicago truncatula]
COG	YP_003380257.1	1.00E-78	protease-associated PA domain-containing protein [Kribbella flavida DSM 17836]
Swissprot	tr\|O65351\|SUBL_ARATH	4.00E-165	Subtilisin-like protease (Precursor)
trEMBL	tr\|Q2HV71\|Q2HV71_MEDTR	0	Subtilisin-like serine protease {ECO:0000313\|EMBL:AES80323.1}

Sequence

Transcript Sequence

>Glyur000243s00013140.1
ATGGCTAGGACTAGAGGTTCACCTCTTGCTCCCCGAGGTTGTCGAAGACGACCAACAGCTTCTGTACACAGAGAACGTGCTCCTCCAGAGGCACATGAGGCACCTCAGGATGCATCCATACNTGCTGCTGCCCTGCTTTTGTCATTTGATGGTGGGCCCGTGGATAGCTCACTTTTGAGGTCTTATGGCAGTCATGTTGCGTTTAATATATGGAGAGGAGTGAGTTCCACTTCCACATACATAGTCCATATGGACAAATCCCTCTTCCCTCAAGTCTTCACAACCCATCATGATTGGTTCAAATCCACCCTTCATTCCCTAGTTGATGATCACCCATCAAAGGATCAATCACAGAAACTAGTGTACACCTATGACCATGCCATGTATGGCTTTAGTGCTGTGNTATCTTCAGATGAGTTAGAGGCTGTTAAGAACACACATGGTTTTGTTGCAGCATACAAAGACAGAACTGCCACCATTGACACAACTCACACCTTTGAATTCCTCTCCCTAGATGACTCTTCTTCTAGTGGCCTATGGCATGCTTCAAATCTTGGGGAGGGTGTGATTGTTGGTGTCCTTGACTCTGGGGTATGGCCTGAGAGTGAGAGCTTCAAAGATGATGGCATGACAAAGAAAATCCCAAGCAAATGGAAAGGGACATGTGANGAAGGACAAGAATTCAATGCCTCNATGTGCAACTACAAGNTGATTGGAGCTAGNTANTTCAACAAGGGTGTGGTTGCTTCAAATCCAAAGGGTCGAAGAATCAGCATGAACTCAGCTAGAGACACTATGGGACATGGGAGCCACACATCATCAACTGTTGCAGGTAACTATGTCAAAGGAGCATCTTACTTTGGGTATGCTAAAGGGGTAGCAAGAGGCATTGCACCAAGAGCTAGGCTTGCCATTTACAAGGTTGTTTGGGAAGAGAGTCAAGTGGCCTCTGATGTCCTTGCTGGTATGGACCAAGCAATTTCTGATGGGGTTGANGTGATCTCAATTTCAATGGGTTTTGATGGTGTCCCACTTCATGAGGACCCTATAGCAATAGCCTCTTTTGCAGCAATGGAGAAAGGGGTTGTTGTTTCATCTTCAGCTGGTAACTCAGGACCTGAACTTGGAACCTTGCACAATGGAATCCCTTGGGTCCTCACTGTGGCAGCAGGAACCATAGACCGTACATTTGGCACTCTCATCCTTGGAAATGGCCAAAAAGTCATAGGTTGGACNTTGTTTGCAGCAAATGCCATAGTTGAGAATCTCCCACTTGTNTACAACAAGACACTATCTTCATGCAACTCAGTGAAGCTGTTATCTGAGGTTAAGACACCAGTCATCATTCTTTGTGACTCGGTGTCAAAGTCAAATTCTGTGTTTGACCAAATCAGTTCCATTGCAGCAGCAAGTGTGGTAGGGGCAGTGTTTATCTCTGNTGATCCTATGTTAATTGAAACAGGACNTGTAGACTCTCCATGTATTGTAATNAGTCCAAAGGATNCACCTTCTGTGATCAAGTATGCAAAAAGCCATGATGAGAAGCCTATNGCTAGCATAAAGTTTCAGCAAACATTTGTTGGAATAAAGCCAGCACCAGCTGCTGCTTATTACACCTCAAGAGGTCCTTCACCTACCTACCCTGGGGTCTTAAAGCCTGACATAATGGCACCAGGATCTAGAGTCCTTGCTGCTTTTGTCCCTCATAAAAANGTAGCTATGATTGGCACAAATGTGTTATTGCCTAGTGACTACAATTTTATGTCTGGAACATCCATGTCAACCCCTCATGCCTCTGGTGTTGCTGCTCTTCTTAAGGCTGCACATCCTGAATGGAGTNCTGCTGCTATAAGGTCTTCACTAATGACCACAGCTAGTCCTTTGGATAATACACAAAATCCAATAAGGGATAATGGGAATCCATNTCAATATGCTTCCCCTCTTGCAATTGGTGCTGGTGAGATTGACCCTAATAGAGCACTTGATCCAGGTTTGGTATATGATGCTACCCCACAGGACTATGTTGATCTCCTTTGTGCTTTGAGGTTCACAAAGAGTCAAATACTAGCCATTACAAGANCAAACTCCTATAACTGTGCAAACCCATCTTTGGATCTTAACTACCCTTCATTCATTGNTTTCTACAGCAACAAAACAAGATCAGTGGTACACAAGTTTAGGAGGACTGTGACCAATGTTGGTGATGGTGCTGCTANATATAGAGCTAAGGTGACACAACCTAAGGGAACTGTAGTGACTGTGTCACCTGAGACGTTAGCCTTCAGATATAAAAATGAGAAGCAGAGTTACTACATTGTCATANAGTGTGTGAAATACAAGAAAGAAAATGTTACATTTGGGGATCTTGTTTGGAAAGAAGANGGGGGTGCACACAGTGTTAGAAGCCCCATTGTAGTGGCACCAAGTGGAATTGTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00243	162524	166861	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000243s00013140.1	PF05922.11	Inhibitor_I9	79	160	2.60E-12
Glyur000243s00013140.1	PF00082.17	Peptidase_S8	190	662	9.50E-38

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	18.763
SRR1783600	control	18.644
SRR1783602	moderate drought stress	26.232
SRR1811619	moderate drought stress	25.531

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	4.825
DRR006520	Root Summer glycyrrhizin high producing strain	4.689
DRR006521	Root Winter glycyrrhizin high producing strain	0.320
DRR006522	Root Winter glycyrrhizin high producing strain	0.267
DRR006523	Root Summer glycyrrhizin low producing strain	9.708
DRR006524	Root Summer glycyrrhizin low producing strain	10.035
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.225
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.266

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.908
SRR2868004	Drought Stress (root)	0.841
SRR2967015	Control (root)	1.090

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.474
SRR9715740	Leaf	0.296
SRR9715741	Leaf	0.241
SRR9715739	Root	14.995
SRR9715742	Root	13.844
SRR9715743	Root	11.140

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.014
SRR8749029	MeJA induced 9h	0.047
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.023

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.266
SRR8400027	Control - Root	12.153