Gene detail

Gene detail information of Glyur000243s00013139.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G16130.1	6.00E-117	wall associated kinase-like 2
NR	KHN40451.1	0	Wall-associated receptor kinase-like 2 [Glycine soja]
COG	YP_001958461.1	5.00E-25	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q7X8C5\|WAKLB_ARATH	5.00E-129	Wall-associated receptor kinase-like 2 (Precursor)
trEMBL	tr\|K7MUF0\|K7MUF0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G47465.1}

Sequence

Transcript Sequence

>Glyur000243s00013139.1
ATGCCGCGTAATCAGAACCAAACCAGATCCTTAAAAACACCGAAAACAATTGAAGTGCAAAACTCATCTGTTGTCTTTTCTCTGGATAGACTTGTTCACATGGAGCTTCTTCACTACCTCAACAACATTCTTCTCTCCACACTCTTGCTCNTCCAATGTATGTTTCCTCAGTTACTCAACTGCCAACAAGTATACCTCAACAACACTGTCTATGACTGCTCTAACAACCCTTCTGCACCAAAAGGATACCTTTGCAATGGCCTTCAAAAGTCATGCACTTCCTTCTTAGCTTTCAAGTCAAAACCTCCCTACGATAACCCTTTGAGTATTGCATACCTTCTTGGCTCTGAAGCATCTACCATAGCCTCAGTCAACAAGATATCAATAGATGACAAGATTCCTTCCAATAAGTCAATCATTGTCCCAGTCTTTTGTTCATGTGCTGGAAACATCTACCAGCATAGCACACCTTACACTGTGAAGAAGAATGACACCTACTTTGAGTTGGTGAAAGAGACTTACCAGGGTCTCACCACATGCCAGGCAATGATGGGTCAGAATTACTATGCTCCTGTCAGCATTGCTGTTGGTGCTGAGCTCACAGTTCCAGTGCTATGTGCTTGTCCCACAGAAAACCTTACATCAAGAGGGGTTACCTCCTTGCTGGTNTACATGGTGAACTATGGTGACACTGTTAAGTCTATAGGAGAGGCTTATGGTGTTGATGAACAAAGCATGAGAGAGGCCAATGAGTTGCCAGTGACAACAAGTGCAAACAGCAGTGTGATCCTCTATGCCTCGACACCTTTGTTAGTTCCCCTGACAGGAAAGAGTTGCAAACAGAACCCCGATGAATTCTATTGTAAATGTTCCCAGGCACTGCAAGTAGGTGGTGGAAGCTCCAAGGGGGTCTTCTGTGATGAATCTCANGATCCAAAATTCCCTGCCAGATTGGTTACTGCCATAGGTGTTGGCATTGGTGCAGGCTTTCTGTGCCTGTTTCTCTTGGGTTACAGGCTATATCAGTGCATACAGAAAGAGAGGGAAAGCATTCACAAGGAAAGGCTATTCAGGCAAAACGGTGGCTACTTGTTACAAGAAAAGTTCTCATCTTATGGGAATGGAGAAAAGGCAAAGCTTTTCACTGCTGAGGAGCTGCAAAGAGCAACAGATAACTACAACAGGAGTAGGTTTCTTGGTCAAGGTGGCTATGGCATGGTGTACAAAGGAATGTTACCAGATGGAACCATAGTTGCGGTGAAGAAGTCGAAAGAGCTTGAAAGGAACCAGATGGAGACTTTTGTCAATGAAGTGGTCATCTTATCCCAGATCAACCACAGGAACATTGTCAAACTCTTAGGTTGTTGTCTTGAGACAGAAACTCCAACACTAGTCTATGAGTTTATTCCCAATGGAACTCTCTCCCAACACATCCATAAGAAAGACCATGAGTACTCATCCCTTCCATGGGACAGTCGCCTTAGAATTGCATGTGAGGTTGCTGGGGCAGTGGCATATATGCATTTTTCAGCTTCTGTTCCCATCTTCCATAGAGACATCAAACCCACCAATATACTCTTGGACAGTAACTATAGTGCCAAAGTGTCTGATTTTGGGACATCAAGATCAATCCCACTAGATAAGACTCACTTGACCACAGTTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTCAATTCACTGATAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTGTAGAGCTTATAACTGGGAGAAAGCCCATTTCATTCCATTATGAAGAAGAGGGTCAGAATCTGGTTGCACTTTTCATTTCTGTGATGAAGGAGAACCAACTTGACCAGATTTTAGATGCCAGGGTGATTAAGGAGGCAAGGAAAGATGACATTCTTGCCATTGCAAATCTTGCAAAGAGATGCTTGAGACTTAATAGGAAGAAAANGCCAACAATGAAAGAGGTTTCAGCAGAATTAGAAGCACTGAGAAAGGCACAAAGCTCCTTACAAATCAACCATGAGAGGGTCATGGTCATGGAGCCTAACTACCTTTACACTTTCTCCACAATCCTGTTCTTATGTCTGTTTCCTCAGTCAATCAATTGCCAACAAATATACCTTAACACAACTGTCACTGACTGCTCAAGCAACCCTTCTTCACCAAAAGGATACCTCTGCAATGGCCCTCAAAAGTCATGCACTTCCTTCTTAGTTTTCAAGTCCAAACCTCCCGATGACAGCCCGATAAACATTGCCTACCTTCTTGGCTCTGAAGCATCTGAGATAGCCTCAATCAACAACATCTCAAGGGATGACAAGATTTCAACCAACAAATCAATCATTGTCCCAGTCTTTTGTTCATGTTCTGGAAATATCTACCAGCATAGCACACCTTACACTGTGAAGAAGAATGGCACCTACTATATGGTTGTAAAAGAAACTTTCCAAGGNCTCACCACATGCCAGGCATTGATGGGTCAGAATTACTATGCCTCTGATAACATTCCAATTGGNGATGAGCTCACAGTTCCGGTACTGTGTGCTTGTCCCACCGCAAACCAGACAGCAAGAGGGGTCACCTCCTTGCTGGTTTACTCTGTGAACTATGGTGACACGGTTAAGTCCATAGGAGAGGCTTATGGTGTTGATGAACAAAGTATGCTAGAGGCCAATGAGTTGCCAGTGTCACCAGATGCAAACAGAAGCACAAACATCTTTGCCATGACGCCTCTCTTAGTTCCTCTCAGAGGCAAGAGTTGCAAAGAGGACCCTGATAGTTTCTATTGTACCTGTTCCCAGGGAACTCTTGCAGATGGAAGCTCCGGGGGGATCTACTGCGATGAATCTGATGGTCAAAAGTTTCCTTCCAAATTGGTTGCAGCATTAGGTGTTGGCATTGGTGGAGGCTTGATGTGTTTGTTTCTTTTGGGTTACAAGTTATATCTCTGCATACAGGAAAAGAGAGCAACCATTCATAAGGAAAAGCTGTTCAGGCAAAACGGTGGCTACTTGTTACAAGAGAAGTTCTCATCTTATGGAAATGGAGAAAAGACAAAGCTTTTCACTGCAGAGGAGCTACAAAGAGCAACAGATAACTACAACAGGAGTAGGTTTCTTGGTCAGGGTGGCTTTGGCATGGTGTACAAAGGGATGTTACCAGATGGAACCATTGTTGCAGTTAAAAAGTCAAAAGAGCTTGAAAGGAACCAGATGGAGACTTTTGTCAATGAAGTGGTCATCTTATCACAGATCAACCACAGGAACATTGTCAAACTCTTAGGTTGTTGTCTTGAGACAGAAACTCCAACACTAGTCTATGAGTTTATTCCCAATGGAACTCTTTCCCAACACATCCATAAGAAAGACCATGAGTACTCATCCCTTCCATGGGACAGTCGCCATAGAATTGCATGTGAGGTTGCTGGGGCAGTGGCGTATATGCATTTTTCAGCTTCTGTTCCCATCTTCCATAGAGACATCAAACCCACCAATATACTCTTGGACAGTAACTATAGTGCCAAAGTGTCTGATTTTGGGACATCAAGATCAATCCCACTAGATAAGACTCACTTGACCACAGTTGTAGGAGGAACTTTTGGGTACATAGACCCTGAATATTTTCAGTCTAGTCAATTCACAGATAGAAGCGATGTGTATAGCTTTGGGGTTGTGCTTGTAGAGCTCATAACTGGGAGAAAGNCCATTTCATTCCAGGATGAAGATGAGGGTCAGAATCTGATTGCACATTTCATTTCTGNGATGAAGGAGAACCAAGTTTCTGAGATTTTAGATGCCATGGTGCATAAGGAAGCAAGGAAAGAAGACATTCTTGCCATTGCAAATCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAGCAGAATTAGAAGCACTGAGAAAAGCACAAAGCTCCTTACAAATCAACCATGATCATGAGTCACTATCAAGTGATGGACAATCATTTGAGCACACAACTAATGACAAGATCCAAGAATCTGGAGAGGAAAGTATTTTGCTATCCTTACAAATGGAGTCCACATCTTTCTAA

Protein Sequence

>Glyur000243s00013139.1
MPRNQNQTRSLKTPKTIEVQNSSVVFSLDRLVHMELLHYLNNILLSTLLLXQCMFPQLLNCQQVYLNNTVYDCSNNPSAPKGYLCNGLQKSCTSFLAFKSKPPYDNPLSIAYLLGSEASTIASVNKISIDDKIPSNKSIIVPVFCSCAGNIYQHSTPYTVKKNDTYFELVKETYQGLTTCQAMMGQNYYAPVSIAVGAELTVPVLCACPTENLTSRGVTSLLVYMVNYGDTVKSIGEAYGVDEQSMREANELPVTTSANSSVILYASTPLLVPLTGKSCKQNPDEFYCKCSQALQVGGGSSKGVFCDESXDPKFPARLVTAIGVGIGAGFLCLFLLGYRLYQCIQKERESIHKERLFRQNGGYLLQEKFSSYGNGEKAKLFTAEELQRATDNYNRSRFLGQGGYGMVYKGMLPDGTIVAVKKSKELERNQMETFVNEVVILSQINHRNIVKLLGCCLETETPTLVYEFIPNGTLSQHIHKKDHEYSSLPWDSRLRIACEVAGAVAYMHFSASVPIFHRDIKPTNILLDSNYSAKVSDFGTSRSIPLDKTHLTTVVGGTFGYIDPEYFQSSQFTDKSDVYSFGVVLVELITGRKPISFHYEEEGQNLVALFISVMKENQLDQILDARVIKEARKDDILAIANLAKRCLRLNRKKXPTMKEVSAELEALRKAQSSLQINHERVMVMEPNYLYTFSTILFLCLFPQSINCQQIYLNTTVTDCSSNPSSPKGYLCNGPQKSCTSFLVFKSKPPDDSPINIAYLLGSEASEIASINNISRDDKISTNKSIIVPVFCSCSGNIYQHSTPYTVKKNGTYYMVVKETFQGLTTCQALMGQNYYASDNIPIGDELTVPVLCACPTANQTARGVTSLLVYSVNYGDTVKSIGEAYGVDEQSMLEANELPVSPDANRSTNIFAMTPLLVPLRGKSCKEDPDSFYCTCSQGTLADGSSGGIYCDESDGQKFPSKLVAALGVGIGGGLMCLFLLGYKLYLCIQEKRATIHKEKLFRQNGGYLLQEKFSSYGNGEKTKLFTAEELQRATDNYNRSRFLGQGGFGMVYKGMLPDGTIVAVKKSKELERNQMETFVNEVVILSQINHRNIVKLLGCCLETETPTLVYEFIPNGTLSQHIHKKDHEYSSLPWDSRHRIACEVAGAVAYMHFSASVPIFHRDIKPTNILLDSNYSAKVSDFGTSRSIPLDKTHLTTVVGGTFGYIDPEYFQSSQFTDRSDVYSFGVVLVELITGRKXISFQDEDEGQNLIAHFISXMKENQVSEILDAMVHKEARKEDILAIANLAMRCLRLNGKKRPTMKEVSAELEALRKAQSSLQINHDHESLSSDGQSFEHTTNDKIQESGEESILLSLQMESTSF

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00243	151626	158852	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000243s00013139.1	PF01476.15	LysM	158	203	0.12
Glyur000243s00013139.1	PF01476.15	LysM	224	252	0.0034
Glyur000243s00013139.1	PF00069.20	Pkinase	394	661	5.20E-48
Glyur000243s00013139.1	PF01476.15	LysM	870	898	0.0026
Glyur000243s00013139.1	PF00069.20	Pkinase	1039	1306	7.80E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.645
SRR1783600	control	0.613
SRR1783602	moderate drought stress	0.242
SRR1811619	moderate drought stress	0.284

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.130
DRR006520	Root Summer glycyrrhizin high producing strain	0.081
DRR006521	Root Winter glycyrrhizin high producing strain	0.027
DRR006522	Root Winter glycyrrhizin high producing strain	0.026
DRR006523	Root Summer glycyrrhizin low producing strain	1.016
DRR006524	Root Summer glycyrrhizin low producing strain	1.048
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.198
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.200

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.468
SRR2868004	Drought Stress (root)	10.525
SRR2967015	Control (root)	6.601

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	2.437
SRR9715740	Leaf	5.912
SRR9715741	Leaf	3.307
SRR9715739	Root	0.291
SRR9715742	Root	0.280
SRR9715743	Root	0.274

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.452
SRR8749028	MeJA induced 9h	0.277
SRR8749029	MeJA induced 9h	0.178
SRR8749030	Uninduced	2.525
SRR8749031	Uninduced	1.268
SRR8749032	Uninduced	0.089

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.375
SRR8400027	Control - Root	1.566