Gene detail information of Glyur000243s00013138 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G44800.1 | 1.00E-18 | chromatin remodeling 4 |
| NR | XP_004492814.1 | 0 | PREDICTED: uncharacterized protein LOC101500411 [Cicer arietinum] |
| Swissprot | tr|F4KBP5|CHR4_ARATH | 8.00E-19 | Protein CHROMATIN REMODELING 4 {ECO:0000303|PubMed:16547115} |
| trEMBL | tr|Q2HV80|Q2HV80_MEDTR | 0 | Homeodomain-like {ECO:0000313|EMBL:ABD28567.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00243 | 145017 | 151096 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.638 |
| SRR1783600 | control | 4.619 |
| SRR1783602 | moderate drought stress | 7.654 |
| SRR1811619 | moderate drought stress | 7.657 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.707 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.554 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.465 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.255 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.721 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.757 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.008 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.982 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.396 |
| SRR2868004 | Drought Stress (root) | 8.058 |
| SRR2967015 | Control (root) | 8.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.099 |
| SRR9715740 | Leaf | 3.218 |
| SRR9715741 | Leaf | 3.766 |
| SRR9715739 | Root | 0.388 |
| SRR9715742 | Root | 2.405 |
| SRR9715743 | Root | 2.276 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.499 |
| SRR8749028 | MeJA induced 9h | 7.163 |
| SRR8749029 | MeJA induced 9h | 4.448 |
| SRR8749030 | Uninduced | 3.528 |
| SRR8749031 | Uninduced | 1.296 |
| SRR8749032 | Uninduced | 1.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.877 |
| SRR8400027 | Control - Root | 9.003 |