Gene detail

Gene detail information of Glyur000243s00013134

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G07020.1	3.00E-161	UDP-Glycosyltransferase superfamily protein
NR	AES80334.2	0	UDP-glucose:sterol glucosyltransferase [Medicago truncatula]
COG	YP_007068604.1	3.00E-77	Sterol 3-beta-glucosyltransferase [Calothrix sp. PCC 7507]
Swissprot	tr\|Q9M8Z7\|U80A2_ARATH	0	Sterol 3-beta-glucosyltransferase UGT80A2
trEMBL	tr\|G7KQK6\|G7KQK6_MEDTR	0	UDP-glucose:sterol glucosyltransferase {ECO:0000313\|EMBL:AES80334.2}

Sequence

Transcript Sequence

>Glyur000243s00013134.1
ATGTTGAAACACGCTTCCATGGTTAAAGATGATGGTACTGTAGAAATTGAAGTTCCAAGAGATGTTAAGCCTCCTTCTCCAGAAATTGGAACGGGGGTTATCGATCGTGATAATCATGGTGGATCTCACAAGGAAACACCCATTCAAGATATTCGGCCGATTCCGCCGCTTCAAATTGTAATGCTTATAGTGGGCACACGGGGAGATGTCCAGCCATTTGTTGCCATTGGGAAACGTCTGCAGGTAGATGGCCACAGGGTTAGGCTAGCTACTCATAAAAATTTTGAAGATTTTGTCTTGAATGCAGGGTTGGAGTTTTACCCTTTAGGCGGAGATCCCAAAGTTCTTGCTGGCTATATGGTCAAGAATAAAGGCTTCTTGCCATCAGGGCCTTCAGAAATACATTTACAAAGAAATCAAATCAAAGCTATTATTAATTCTTTGCTTCCTGCATGCAACNGTCAGTACCCAGATTCTAATGCTCCATTTAAGGCAGATGCAATAATTGCCAATCCTCCAGCATATGGGCATACTCATGTTGCTGAGTTTCTAAATGTTCCACTTCACATATTCTTCACAATGCCATGGACGAAGAAGAAGCTGAAGTTAAGGCCTATTACTTATCTACGTGGATCTTACACTTCCCCTCCTGATGTGCCCTATGGTTATATATGGAGCCCTCACTTGGTCCCCAAACCAAAAGANTGGGGGCCCAACATTGACGTTGTTGGATTTTGTTTCCTTGACCTTGCTTCAAATTATGAACCACCAAAGTCACTAGTAGATTGGCTTGAAGAAGGCGAAAAACCTATATATGTTGGATTTGGTAGCCTTCCTCTACCAGAACCAGAAAAAATGACAAGAATTATAGTTCAAGCTTTGGAAAAAACAGGGCAGAGAGGTATCATCAACAGAGGATGGGGTGGTCTTGGAAATTTGGCAGGACTAAATAAATCTGTGTACTTATTGGACAACTGTCCGCATGATTGGCTATTTCCACGATGCACTGCTGTGGTACATCATGGGGGTGCCGGAACAACTGCTGCTGGTCTTAGAGCTGAATGCCCAACAACTATTGTGCCATTCTTCGGGGACCAGCCATTTTGGGGNGAGCGGGTGCGCGCCAGAGGAGTAGGTCCTGCACCCATCCCAGTGGAGGAGTTTACATTGGAAAGGCTGGTTGATGCCATACGCTTCATGNTGAAGCCAGAGGTGAAAAGGAGTGCTGTTGAAATTGCCAACGCCATGAAGAACGAAGATGGGGTGGTAGGAGCAGTTAACGCCTTCTATAAACATTATGCTAAGGCCGAGCCCAAGCCAGTAGCCAAATCTAGTTCTGTTATACCAGCAATTGTGTTATATCAGCAATTGTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00243	135595	141802	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0005975 carbohydrate metabolic process

GO:0008152 metabolic process

GO:0030259 lipid glycosylation

molecular_function
GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000243s00013134.1	PF03033.15	Glyco_transf_28	59	199	3.60E-28
Glyur000243s00013134.1	PF00201.13	UDPGT	257	402	6.80E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.897
SRR1783600	control	0.723
SRR1783602	moderate drought stress	0.882
SRR1811619	moderate drought stress	0.901

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.364
DRR006520	Root Summer glycyrrhizin high producing strain	1.227
DRR006521	Root Winter glycyrrhizin high producing strain	1.016
DRR006522	Root Winter glycyrrhizin high producing strain	0.865
DRR006523	Root Summer glycyrrhizin low producing strain	2.155
DRR006524	Root Summer glycyrrhizin low producing strain	2.134
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.470
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.580

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.156
SRR2868004	Drought Stress (root)	3.104
SRR2967015	Control (root)	2.560

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.317
SRR9715740	Leaf	0.179
SRR9715741	Leaf	0.224
SRR9715739	Root	0.737
SRR9715742	Root	0.720
SRR9715743	Root	0.499

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.913
SRR8749028	MeJA induced 9h	0.371
SRR8749029	MeJA induced 9h	0.843
SRR8749030	Uninduced	0.535
SRR8749031	Uninduced	1.096
SRR8749032	Uninduced	0.973

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	3.165
SRR8400027	Control - Root	2.270