Gene detail information of Glyur000243s00013129 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G30390.1 | 2.00E-26 | |
| NR | ABN05865.1 | 5.98E-49 | hypothetical protein MtrDRAFT_AC148994g36v2 [Medicago truncatula] |
| trEMBL | tr|A2Q1P9|A2Q1P9_MEDTR | 2.00E-49 | Putative uncharacterized protein {ECO:0000313|EMBL:ABN05865.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00243 | 91000 | 93635 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 23.710 |
| SRR1783600 | control | 23.766 |
| SRR1783602 | moderate drought stress | 20.789 |
| SRR1811619 | moderate drought stress | 20.893 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.496 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.197 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 18.652 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 18.404 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.954 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.972 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.490 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 103.586 |
| SRR2868004 | Drought Stress (root) | 85.640 |
| SRR2967015 | Control (root) | 82.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 62.032 |
| SRR9715740 | Leaf | 64.472 |
| SRR9715741 | Leaf | 66.730 |
| SRR9715739 | Root | 55.772 |
| SRR9715742 | Root | 41.318 |
| SRR9715743 | Root | 44.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 33.546 |
| SRR8749028 | MeJA induced 9h | 25.705 |
| SRR8749029 | MeJA induced 9h | 27.510 |
| SRR8749030 | Uninduced | 25.515 |
| SRR8749031 | Uninduced | 22.530 |
| SRR8749032 | Uninduced | 25.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.138 |
| SRR8400027 | Control - Root | 53.884 |