Gene detail information of Glyur000242s00021070 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G13950.3 | 6.00E-50 | |
| NR | XP_007151714.1 | 5.75E-180 | hypothetical protein PHAVU_004G069600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C2W8|V7C2W8_PHAVU | 2.00E-180 | Uncharacterized protein {ECO:0000313|EMBL:ESW23708.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00242 | 199716 | 218877 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.222 |
| SRR1783600 | control | 3.875 |
| SRR1783602 | moderate drought stress | 7.684 |
| SRR1811619 | moderate drought stress | 7.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.175 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.152 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.229 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.872 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.814 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.587 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.572 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.551 |
| SRR2868004 | Drought Stress (root) | 9.506 |
| SRR2967015 | Control (root) | 10.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.523 |
| SRR9715740 | Leaf | 5.379 |
| SRR9715741 | Leaf | 6.553 |
| SRR9715739 | Root | 0.332 |
| SRR9715742 | Root | 7.664 |
| SRR9715743 | Root | 5.541 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.098 |
| SRR8749028 | MeJA induced 9h | 12.196 |
| SRR8749029 | MeJA induced 9h | 2.964 |
| SRR8749030 | Uninduced | 4.812 |
| SRR8749031 | Uninduced | 7.371 |
| SRR8749032 | Uninduced | 2.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.973 |
| SRR8400027 | Control - Root | 10.018 |