Gene detail information of Glyur000242s00021055 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003548854.1 | 2.28E-10 | PREDICTED: ethylene-responsive transcription factor ERF113-like [Glycine max] |
| trEMBL | tr|I1ML94|I1ML94_SOYBN | 8.00E-11 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G05190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00242 | 49891 | 51799 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.962 |
| SRR1783600 | control | 10.176 |
| SRR1783602 | moderate drought stress | 11.499 |
| SRR1811619 | moderate drought stress | 11.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.281 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.629 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 47.982 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 49.495 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 39.444 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 36.423 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.279 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.561 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.670 |
| SRR2868004 | Drought Stress (root) | 3.965 |
| SRR2967015 | Control (root) | 5.895 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.554 |
| SRR9715740 | Leaf | 1.873 |
| SRR9715741 | Leaf | 2.622 |
| SRR9715739 | Root | 1.498 |
| SRR9715742 | Root | 2.191 |
| SRR9715743 | Root | 1.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.098 |
| SRR8749028 | MeJA induced 9h | 52.616 |
| SRR8749029 | MeJA induced 9h | 24.765 |
| SRR8749030 | Uninduced | 20.925 |
| SRR8749031 | Uninduced | 27.993 |
| SRR8749032 | Uninduced | 15.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.223 |
| SRR8400027 | Control - Root | 2.045 |