Gene detail information of Glyur000241s00022763 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23430.1 | 2.00E-168 | phosphate 1 |
| NR | XP_003596447.1 | 0 | Pho1-like protein [Medicago truncatula] |
| Swissprot | tr|Q8S403|PHO1_ARATH | 0 | Phosphate transporter PHO1 |
| trEMBL | tr|A0A072VHJ2|A0A072VHJ2_MEDTR | 0 | Phosphate transporter PHO1-like protein {ECO:0000313|EMBL:KEH41096.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00241 | 174765 | 186769 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000241s00022763.1 | PF03105.14 | SPX | 2 | 299 | 4.50E-43 |
| Glyur000241s00022763.1 | PF03124.9 | EXS | 388 | 484 | 1.50E-12 |
| Glyur000241s00022763.1 | PF03124.9 | EXS | 491 | 618 | 4.20E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.537 |
| SRR1783600 | control | 10.378 |
| SRR1783602 | moderate drought stress | 3.055 |
| SRR1811619 | moderate drought stress | 2.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 45.223 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 44.825 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.583 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.033 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.335 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.291 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 133.682 |
| SRR2868004 | Drought Stress (root) | 208.566 |
| SRR2967015 | Control (root) | 134.451 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.055 |
| SRR9715740 | Leaf | 2.168 |
| SRR9715741 | Leaf | 1.488 |
| SRR9715739 | Root | 6.440 |
| SRR9715742 | Root | 31.870 |
| SRR9715743 | Root | 28.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.132 |
| SRR8749028 | MeJA induced 9h | 24.111 |
| SRR8749029 | MeJA induced 9h | 18.611 |
| SRR8749030 | Uninduced | 20.336 |
| SRR8749031 | Uninduced | 66.172 |
| SRR8749032 | Uninduced | 35.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 50.112 |
| SRR8400027 | Control - Root | 58.462 |