Gene detail information of Glyur000241s00022762 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14310.1 | 0 | Transducin/WD40 repeat-like superfamily protein |
| NR | XP_004497974.1 | 0 | PREDICTED: uncharacterized protein LOC101494794 [Cicer arietinum] |
| trEMBL | tr|A0A072VSI4|A0A072VSI4_MEDTR | 0 | Transducin/WD40 domain-like protein, putative {ECO:0000313|EMBL:KEH41095.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00241 | 134093 | 138447 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.383 |
| SRR1783600 | control | 3.301 |
| SRR1783602 | moderate drought stress | 2.012 |
| SRR1811619 | moderate drought stress | 2.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.402 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.450 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.164 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.160 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.765 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.720 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.720 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.742 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.022 |
| SRR2868004 | Drought Stress (root) | 10.978 |
| SRR2967015 | Control (root) | 9.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.894 |
| SRR9715740 | Leaf | 0.093 |
| SRR9715741 | Leaf | 0.626 |
| SRR9715739 | Root | 2.099 |
| SRR9715742 | Root | 2.229 |
| SRR9715743 | Root | 1.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.120 |
| SRR8749028 | MeJA induced 9h | 10.629 |
| SRR8749029 | MeJA induced 9h | 6.515 |
| SRR8749030 | Uninduced | 2.773 |
| SRR8749031 | Uninduced | 1.100 |
| SRR8749032 | Uninduced | 1.299 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.351 |
| SRR8400027 | Control - Root | 5.435 |