Gene detail information of Glyur000241s00022747 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G43310.2 | 0 | COP1-interacting protein-related |
| NR | KHN10069.1 | 0 | hypothetical protein glysoja_034311 [Glycine soja] |
| trEMBL | tr|I1L7F1|I1L7F1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G00660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00241 | 14902 | 24146 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.102 |
| SRR1783600 | control | 4.096 |
| SRR1783602 | moderate drought stress | 3.559 |
| SRR1811619 | moderate drought stress | 3.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.183 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.116 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.956 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.829 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.528 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.575 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.418 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.389 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.967 |
| SRR2868004 | Drought Stress (root) | 2.083 |
| SRR2967015 | Control (root) | 2.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.546 |
| SRR9715740 | Leaf | 2.270 |
| SRR9715741 | Leaf | 2.146 |
| SRR9715739 | Root | 0.296 |
| SRR9715742 | Root | 1.328 |
| SRR9715743 | Root | 1.640 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.964 |
| SRR8749028 | MeJA induced 9h | 3.642 |
| SRR8749029 | MeJA induced 9h | 1.913 |
| SRR8749030 | Uninduced | 0.585 |
| SRR8749031 | Uninduced | 0.114 |
| SRR8749032 | Uninduced | 0.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.387 |
| SRR8400027 | Control - Root | 6.082 |