Gene detail information of Glyur000240s00016384 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38990.1 | 6.00E-22 | Malectin/receptor-like protein kinase family protein |
| NR | KHN37922.1 | 2.09E-43 | Receptor-like protein kinase ANXUR2 [Glycine soja] |
| Swissprot | tr|Q9FID9|Y5389_ARATH | 3.00E-24 | Probable receptor-like protein kinase At5g38990 (Precursor) |
| trEMBL | tr|K7MV05|K7MV05_SOYBN | 1.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G50691.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00240 | 124764 | 126298 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.3.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000240s00016384.1 | PF07714.12 | Pkinase_Tyr | 21 | 139 | 3.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.212 |
| SRR1783600 | control | 0.180 |
| SRR1783602 | moderate drought stress | 1.942 |
| SRR1811619 | moderate drought stress | 1.621 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.425 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.211 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.223 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.381 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.264 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.242 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.379 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.250 |
| SRR2868004 | Drought Stress (root) | 0.357 |
| SRR2967015 | Control (root) | 0.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.187 |
| SRR9715740 | Leaf | 0.099 |
| SRR9715741 | Leaf | 0.269 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.311 |
| SRR9715743 | Root | 0.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.579 |
| SRR8749028 | MeJA induced 9h | 11.089 |
| SRR8749029 | MeJA induced 9h | 2.672 |
| SRR8749030 | Uninduced | 3.732 |
| SRR8749031 | Uninduced | 1.465 |
| SRR8749032 | Uninduced | 3.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.252 |
| SRR8400027 | Control - Root | 0.341 |