Gene detail information of Glyur000240s00016375 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G58000.1 | 2.00E-16 | VQ motif-containing protein |
| NR | XP_004488571.1 | 1.52E-67 | PREDICTED: uncharacterized protein LOC101488683 [Cicer arietinum] |
| trEMBL | tr|I1MJI7|I1MJI7_SOYBN | 4.00E-64 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G42280.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00240 | 62593 | 63102 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000240s00016375.1 | PF05678.9 | VQ | 39 | 67 | 1.70E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.536 |
| SRR1783600 | control | 0.405 |
| SRR1783602 | moderate drought stress | 0.269 |
| SRR1811619 | moderate drought stress | 0.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.023 |
| SRR2868004 | Drought Stress (root) | 20.190 |
| SRR2967015 | Control (root) | 15.525 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.105 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.487 |
| SRR8749028 | MeJA induced 9h | 4.338 |
| SRR8749029 | MeJA induced 9h | 0.512 |
| SRR8749030 | Uninduced | 2.390 |
| SRR8749031 | Uninduced | 3.269 |
| SRR8749032 | Uninduced | 3.387 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.643 |
| SRR8400027 | Control - Root | 3.318 |