Gene detail information of Glyur000240s00016374 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004488572.1 | 7.31E-31 | PREDICTED: uncharacterized protein LOC101489021 [Cicer arietinum] |
| trEMBL | tr|I3SDA0|I3SDA0_MEDTR | 5.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:AFK38242.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00240 | 55412 | 55651 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.727 |
| SRR1783600 | control | 0.652 |
| SRR1783602 | moderate drought stress | 0.940 |
| SRR1811619 | moderate drought stress | 0.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 44.504 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.182 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.740 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.751 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.656 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.058 |
| SRR2868004 | Drought Stress (root) | 161.419 |
| SRR2967015 | Control (root) | 127.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 354.525 |
| SRR9715740 | Leaf | 110.795 |
| SRR9715741 | Leaf | 430.132 |
| SRR9715739 | Root | 15.880 |
| SRR9715742 | Root | 34.324 |
| SRR9715743 | Root | 28.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.276 |
| SRR8749028 | MeJA induced 9h | 331.421 |
| SRR8749029 | MeJA induced 9h | 61.524 |
| SRR8749030 | Uninduced | 193.225 |
| SRR8749031 | Uninduced | 472.031 |
| SRR8749032 | Uninduced | 333.798 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.215 |
| SRR8400027 | Control - Root | 42.492 |