Gene detail information of Glyur000240s00016366 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G68260.1 | 8.00E-65 | Thioesterase superfamily protein |
| NR | KEH27988.1 | 1.32E-22 | pollen thioesterase [Medicago truncatula] |
| COG | YP_900758.1 | 3.00E-23 | thioesterase superfamily protein [Pelobacter propionicus DSM 2379] |
| trEMBL | tr|A0A072UFU2|A0A072UFU2_MEDTR | 5.00E-23 | Pollen thioesterase {ECO:0000313|EMBL:KEH27988.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00240 | 26913 | 34338 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000240s00016366.2 | PF03061.17 | 4HBT | 91 | 174 | 3.10E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.283 |
| SRR1783600 | control | 4.226 |
| SRR1783602 | moderate drought stress | 3.420 |
| SRR1811619 | moderate drought stress | 3.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.359 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.940 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.433 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.979 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.862 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.949 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.301 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.231 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.951 |
| SRR2868004 | Drought Stress (root) | 3.625 |
| SRR2967015 | Control (root) | 3.769 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.520 |
| SRR9715740 | Leaf | 3.072 |
| SRR9715741 | Leaf | 2.111 |
| SRR9715739 | Root | 3.538 |
| SRR9715742 | Root | 2.800 |
| SRR9715743 | Root | 2.562 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.061 |
| SRR8749028 | MeJA induced 9h | 4.440 |
| SRR8749029 | MeJA induced 9h | 2.933 |
| SRR8749030 | Uninduced | 2.650 |
| SRR8749031 | Uninduced | 0.864 |
| SRR8749032 | Uninduced | 1.507 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.175 |
| SRR8400027 | Control - Root | 9.380 |