Gene detail information of Glyur000238s00016803 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09050.1 | 3.00E-57 | |
| NR | KHN24302.1 | 1.81E-137 | hypothetical protein glysoja_041104 [Glycine soja] |
| trEMBL | tr|A0A072U0F6|A0A072U0F6_MEDTR | 3.00E-135 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH23142.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00238 | 226424 | 230475 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.827 |
| SRR1783600 | control | 0.774 |
| SRR1783602 | moderate drought stress | 1.415 |
| SRR1811619 | moderate drought stress | 1.456 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.242 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.265 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.156 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.107 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.035 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.029 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.846 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.747 |
| SRR2868004 | Drought Stress (root) | 2.688 |
| SRR2967015 | Control (root) | 2.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.594 |
| SRR9715740 | Leaf | 4.566 |
| SRR9715741 | Leaf | 2.463 |
| SRR9715739 | Root | 0.417 |
| SRR9715742 | Root | 0.667 |
| SRR9715743 | Root | 0.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.459 |
| SRR8749028 | MeJA induced 9h | 2.023 |
| SRR8749029 | MeJA induced 9h | 1.483 |
| SRR8749030 | Uninduced | 0.935 |
| SRR8749031 | Uninduced | 0.489 |
| SRR8749032 | Uninduced | 0.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.989 |
| SRR8400027 | Control - Root | 2.842 |