Gene detail information of Glyur000238s00016790 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09085.1 | 3.00E-29 | Protein of unknown function (DUF962) |
| NR | KHN08299.1 | 1.12E-43 | hypothetical protein glysoja_034107 [Glycine soja] |
| COG | YP_004980855.1 | 5.00E-21 | hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5] |
| trEMBL | tr|K7MTE9|K7MTE9_SOYBN | 6.00E-44 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G42401.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00238 | 144370 | 144870 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000238s00016790.1 | PF06127.6 | DUF962 | 4 | 60 | 5.80E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.071 |
| SRR1783600 | control | 5.034 |
| SRR1783602 | moderate drought stress | 7.781 |
| SRR1811619 | moderate drought stress | 7.760 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.011 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.618 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 12.645 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.502 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.102 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.592 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 38.703 |
| SRR2868004 | Drought Stress (root) | 45.620 |
| SRR2967015 | Control (root) | 54.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 33.771 |
| SRR9715740 | Leaf | 37.383 |
| SRR9715741 | Leaf | 42.293 |
| SRR9715739 | Root | 26.711 |
| SRR9715742 | Root | 21.591 |
| SRR9715743 | Root | 22.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.724 |
| SRR8749028 | MeJA induced 9h | 41.357 |
| SRR8749029 | MeJA induced 9h | 58.687 |
| SRR8749030 | Uninduced | 63.359 |
| SRR8749031 | Uninduced | 118.842 |
| SRR8749032 | Uninduced | 108.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.523 |
| SRR8400027 | Control - Root | 27.005 |