Gene detail information of Glyur000237s00014406 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05700.1 | 3.00E-25 | Drought-responsive family protein |
| NR | XP_003521581.1 | 1.20E-84 | PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 3-like [Glycine max] |
| Swissprot | tr|Q84J70|DI193_ARATH | 8.00E-30 | Protein DEHYDRATION-INDUCED 19 homolog 3 |
| trEMBL | tr|I1JQP5|I1JQP5_SOYBN | 4.00E-85 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G37530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00237 | 108477 | 112643 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000237s00014406.1 | PF05605.7 | zf-Di19 | 43 | 83 | 8.90E-14 |
| Glyur000237s00014406.1 | PF14571.1 | Di19_C | 94 | 149 | 8.40E-07 |
| Glyur000237s00014406.1 | PF14571.1 | Di19_C | 146 | 178 | 7.40E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.894 |
| SRR1783600 | control | 8.155 |
| SRR1783602 | moderate drought stress | 10.186 |
| SRR1811619 | moderate drought stress | 9.953 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 91.301 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 91.150 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.463 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.636 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 160.596 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 162.014 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.652 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.019 |
| SRR2868004 | Drought Stress (root) | 33.613 |
| SRR2967015 | Control (root) | 56.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 77.388 |
| SRR9715740 | Leaf | 72.487 |
| SRR9715741 | Leaf | 86.764 |
| SRR9715739 | Root | 14.883 |
| SRR9715742 | Root | 53.980 |
| SRR9715743 | Root | 41.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 97.520 |
| SRR8749028 | MeJA induced 9h | 65.223 |
| SRR8749029 | MeJA induced 9h | 79.472 |
| SRR8749030 | Uninduced | 157.133 |
| SRR8749031 | Uninduced | 37.958 |
| SRR8749032 | Uninduced | 25.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.503 |
| SRR8400027 | Control - Root | 38.364 |