Gene detail information of Glyur000237s00014386 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47480.1 | 6.00E-10 | Protein of unknown function (DUF3511) |
| NR | XP_006604736.1 | 9.17E-43 | PREDICTED: uncharacterized protein LOC100807345 [Glycine max] |
| trEMBL | tr|K7MZK0|K7MZK0_SOYBN | 3.00E-43 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G40230.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00237 | 22286 | 22564 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000237s00014386.1 | PF12023.3 | DUF3511 | 45 | 91 | 1.90E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.582 |
| SRR1783600 | control | 1.158 |
| SRR1783602 | moderate drought stress | 1.486 |
| SRR1811619 | moderate drought stress | 1.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.555 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.026 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.187 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.390 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.343 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.295 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.785 |
| SRR2868004 | Drought Stress (root) | 1.555 |
| SRR2967015 | Control (root) | 3.991 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.128 |
| SRR9715740 | Leaf | 0.591 |
| SRR9715741 | Leaf | 0.552 |
| SRR9715739 | Root | 0.126 |
| SRR9715742 | Root | 0.929 |
| SRR9715743 | Root | 0.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 80.850 |
| SRR8749028 | MeJA induced 9h | 9.151 |
| SRR8749029 | MeJA induced 9h | 20.249 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.180 |
| SRR8749032 | Uninduced | 0.273 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.862 |
| SRR8400027 | Control - Root | 1.639 |