Gene detail information of Glyur000237s00014384 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38700.1 | 4.00E-21 | |
| NR | XP_007145168.1 | 2.76E-41 | hypothetical protein PHAVU_007G216200g [Phaseolus vulgaris] |
| trEMBL | tr|V7BH51|V7BH51_PHAVU | 1.00E-41 | Uncharacterized protein {ECO:0000313|EMBL:ESW17162.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00237 | 15656 | 16119 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000237s00014384.1 | PF05553.6 | DUF761 | 107 | 135 | 1.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.106 |
| SRR1811619 | moderate drought stress | 0.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.197 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.555 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.878 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.065 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.208 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 5.643 |
| SRR2868004 | Drought Stress (root) | 6.912 |
| SRR2967015 | Control (root) | 9.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.718 |
| SRR9715740 | Leaf | 0.945 |
| SRR9715741 | Leaf | 1.116 |
| SRR9715739 | Root | 8.727 |
| SRR9715742 | Root | 16.147 |
| SRR9715743 | Root | 17.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.871 |
| SRR8749028 | MeJA induced 9h | 2.202 |
| SRR8749029 | MeJA induced 9h | 1.723 |
| SRR8749030 | Uninduced | 2.303 |
| SRR8749031 | Uninduced | 0.461 |
| SRR8749032 | Uninduced | 0.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.253 |
| SRR8400027 | Control - Root | 0.540 |