Gene detail information of Glyur000236s00014250 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26530.1 | 4.00E-26 | Protein of unknown function (DUF1645) |
| NR | XP_003603003.1 | 4.91E-122 | Pheromone receptor-like protein [Medicago truncatula] |
| trEMBL | tr|G7J5T8|G7J5T8_MEDTR | 2.00E-122 | Pheromone receptor-like protein {ECO:0000313|EMBL:AES73254.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00236 | 183068 | 184048 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000236s00014250.1 | PF07816.6 | DUF1645 | 98 | 315 | 8.50E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.863 |
| SRR1783600 | control | 36.726 |
| SRR1783602 | moderate drought stress | 33.024 |
| SRR1811619 | moderate drought stress | 38.383 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 143.605 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 140.306 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 73.655 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 75.053 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 99.396 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 101.721 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 41.993 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 41.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.153 |
| SRR2868004 | Drought Stress (root) | 153.521 |
| SRR2967015 | Control (root) | 159.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 185.827 |
| SRR9715740 | Leaf | 275.074 |
| SRR9715741 | Leaf | 200.593 |
| SRR9715739 | Root | 503.583 |
| SRR9715742 | Root | 199.875 |
| SRR9715743 | Root | 257.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 228.117 |
| SRR8749028 | MeJA induced 9h | 339.728 |
| SRR8749029 | MeJA induced 9h | 531.659 |
| SRR8749030 | Uninduced | 214.311 |
| SRR8749031 | Uninduced | 490.723 |
| SRR8749032 | Uninduced | 356.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 110.886 |
| SRR8400027 | Control - Root | 134.091 |