Gene detail information of Glyur000236s00014244 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26520.1 | 2.00E-09 | |
| NR | XP_003602995.1 | 7.70E-58 | hypothetical protein MTR_3g101240 [Medicago truncatula] |
| trEMBL | tr|G7J5T0|G7J5T0_MEDTR | 3.00E-58 | Transmembrane protein, putative {ECO:0000313|EMBL:AES73246.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00236 | 156217 | 156609 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.455 |
| SRR1783600 | control | 1.247 |
| SRR1783602 | moderate drought stress | 3.587 |
| SRR1811619 | moderate drought stress | 3.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.261 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.715 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.777 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.182 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.949 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.489 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.129 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.793 |
| SRR2868004 | Drought Stress (root) | 0.532 |
| SRR2967015 | Control (root) | 0.596 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.207 |
| SRR9715740 | Leaf | 0.119 |
| SRR9715741 | Leaf | 0.255 |
| SRR9715739 | Root | 0.063 |
| SRR9715742 | Root | 0.310 |
| SRR9715743 | Root | 0.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.081 |
| SRR8749031 | Uninduced | 0.484 |
| SRR8749032 | Uninduced | 0.011 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.504 |
| SRR8400027 | Control - Root | 0.990 |