Gene detail information of Glyur000236s00014230 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47640.1 | 2.00E-118 | |
| NR | XP_003523891.1 | 2.67E-164 | PREDICTED: transmembrane protein 147 [Glycine max] |
| trEMBL | tr|I1JTF4|I1JTF4_SOYBN | 1.00E-164 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G03810.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00236 | 89188 | 93235 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000236s00014230.1 | PF09767.4 | DUF2053 | 2 | 161 | 1.00E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.973 |
| SRR1783600 | control | 34.857 |
| SRR1783602 | moderate drought stress | 46.224 |
| SRR1811619 | moderate drought stress | 45.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 26.237 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 37.705 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 36.131 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.472 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 30.475 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.911 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 90.874 |
| SRR2868004 | Drought Stress (root) | 70.688 |
| SRR2967015 | Control (root) | 76.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.195 |
| SRR9715740 | Leaf | 45.781 |
| SRR9715741 | Leaf | 42.746 |
| SRR9715739 | Root | 43.771 |
| SRR9715742 | Root | 42.289 |
| SRR9715743 | Root | 45.831 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 45.605 |
| SRR8749028 | MeJA induced 9h | 31.318 |
| SRR8749029 | MeJA induced 9h | 25.631 |
| SRR8749030 | Uninduced | 14.707 |
| SRR8749031 | Uninduced | 6.442 |
| SRR8749032 | Uninduced | 16.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 63.400 |
| SRR8400027 | Control - Root | 61.094 |